Variant report

Variant	rs73438561
Chromosome Location	chr6:54980459-54980460
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs3105260	1.00[EUR][1000 genomes]
rs4419660	1.00[ASN][1000 genomes]
rs57915824	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58658626	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59536488	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59630560	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6923998	1.00[EUR][1000 genomes]
rs73434487	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73438551	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73438552	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7356813	1.00[EUR][1000 genomes]
rs7740224	1.00[EUR][1000 genomes]
rs7762218	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7766442	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033543	chr6:54978528-55000338	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54980400-54981600	Weak transcription	Duodenum Mucosa	Duodenum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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