Variant report

Variant	rs73455994
Chromosome Location	chr6:75342245-75342246
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12110337	1.00[EUR][1000 genomes]
rs12111060	1.00[EUR][1000 genomes]
rs58722231	1.00[AMR][1000 genomes]
rs59154435	1.00[AMR][1000 genomes]
rs60601397	1.00[AMR][1000 genomes]
rs61197116	1.00[EUR][1000 genomes]
rs73455996	1.00[EUR][1000 genomes]
rs73464043	1.00[AMR][1000 genomes]
rs73464048	1.00[AMR][1000 genomes]
rs73464053	1.00[AMR][1000 genomes]
rs73464055	1.00[AMR][1000 genomes]
rs73464057	1.00[AMR][1000 genomes]
rs73464060	1.00[AMR][1000 genomes]
rs73464066	1.00[AMR][1000 genomes]
rs73464076	1.00[AMR][1000 genomes]
rs73464087	1.00[AMR][1000 genomes]
rs73464089	1.00[AMR][1000 genomes]
rs73466039	1.00[AMR][1000 genomes]
rs73466040	1.00[AMR][1000 genomes]
rs73466043	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv520746	chr6:75211546-75691814	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv917283	chr6:75234428-75641440	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv830694	chr6:75245483-75446282	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75340200-75342400	Enhancers	Hela-S3	cervix
2	chr6:75340800-75342800	Enhancers	Muscle Satellite Cultured Cells	--
3	chr6:75341000-75342800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr6:75341000-75342800	Enhancers	HSMM	muscle
5	chr6:75341000-75343600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr6:75341200-75342600	Enhancers	HSMMtube	muscle
7	chr6:75341200-75343000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr6:75342000-75347200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:75342000-75347600	Weak transcription	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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