Variant report
Variant | rs73462367 |
---|---|
Chromosome Location | chr13:39005800-39005801 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs57455209 | 1.00[AMR][1000 genomes] |
rs58119652 | 1.00[AMR][1000 genomes] |
rs73462339 | 1.00[AMR][1000 genomes] |
rs73462360 | 1.00[AMR][1000 genomes] |
rs73462361 | 1.00[AMR][1000 genomes] |
rs73462397 | 1.00[AFR][1000 genomes] |
rs73464371 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73464381 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73466323 | 1.00[AMR][1000 genomes] |
rs73466348 | 1.00[AMR][1000 genomes] |
rs73466367 | 1.00[AMR][1000 genomes] |
rs73466371 | 1.00[AMR][1000 genomes] |
rs73468319 | 1.00[AMR][1000 genomes] |
rs73468320 | 1.00[AMR][1000 genomes] |
rs73468321 | 1.00[AMR][1000 genomes] |
rs73468343 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv915901 | chr13:38199035-39032633 | Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 10 gene(s) | inside rSNPs | diseases |
2 | nsv869125 | chr13:38550449-39132813 | Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 10 gene(s) | inside rSNPs | diseases |
3 | nsv949406 | chr13:38561474-39033484 | Transcr. at gene 5' and 3' Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 9 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr13:39005000-39006200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |