The 2.0 version of rSNPBase

Variant report

Variant rs73481212
Chromosome Location chr13:48657833-48657834
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48640200-48661200 Strong transcription Primary T cells fromperipheralblood blood
2 chr13:48644200-48659800 Strong transcription Stomach Smooth Muscle stomach
3 chr13:48645200-48661000 Strong transcription Primary T helper cells PMA-I stimulated --
4 chr13:48645600-48659800 Strong transcription Skeletal Muscle Male skeletal muscle
5 chr13:48645600-48660400 Strong transcription Rectal Mucosa Donor 31 rectum
6 chr13:48645600-48660600 Strong transcription Osteobl bone
7 chr13:48645800-48660600 Strong transcription HSMM muscle
8 chr13:48645800-48661000 Strong transcription HepG2 liver
9 chr13:48646000-48660000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr13:48646000-48660000 Strong transcription Skeletal Muscle Female skeletal muscle
11 chr13:48646200-48658200 Strong transcription NHDF-Ad bronchial
12 chr13:48646200-48661000 Strong transcription Primary T helper cells fromperipheralblood blood
13 chr13:48646400-48660400 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr13:48646600-48658200 Strong transcription Colon Smooth Muscle Colon
15 chr13:48646600-48660400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr13:48646600-48660600 Strong transcription Adipose Nuclei Adipose
17 chr13:48646800-48658000 Strong transcription NH-A brain
18 chr13:48646800-48660000 Strong transcription Fetal Intestine Large intestine
19 chr13:48646800-48660400 Strong transcription Placenta Placenta
20 chr13:48647000-48660600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr13:48647000-48660800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr13:48647000-48662400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr13:48647200-48660000 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr13:48647200-48660600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr13:48647400-48660600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr13:48647400-48660600 Strong transcription Duodenum Mucosa Duodenum
27 chr13:48647400-48660600 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr13:48647400-48663600 Weak transcription Small Intestine intestine
29 chr13:48647600-48660400 Strong transcription Primary neutrophils fromperipheralblood blood
30 chr13:48647800-48658400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr13:48648000-48658200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr13:48648200-48658000 Strong transcription Cortex derived primary cultured neurospheres brain
33 chr13:48648200-48660000 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr13:48648600-48658800 Strong transcription Fetal Lung lung
35 chr13:48648600-48659800 Strong transcription Fetal Muscle Leg muscle
36 chr13:48648600-48660600 Strong transcription iPS-18 Cell Line embryonic stem cell
37 chr13:48648600-48660600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr13:48648600-48660600 Strong transcription Liver Liver
39 chr13:48648600-48660600 Strong transcription Fetal Thymus thymus
40 chr13:48648600-48660800 Strong transcription HUES48 Cell Line embryonic stem cell
41 chr13:48648600-48661000 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr13:48648600-48667400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr13:48648800-48660800 Strong transcription Primary B cells from cord blood blood
44 chr13:48649400-48660400 Strong transcription NHEK skin
45 chr13:48649400-48661000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr13:48649600-48663400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr13:48649800-48658600 Strong transcription Primary hematopoietic stem cells blood
48 chr13:48649800-48659600 Strong transcription H1 Cell Line embryonic stem cell
49 chr13:48649800-48659800 Strong transcription Primary T cells from cord blood blood
50 chr13:48649800-48660600 Strong transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015