Variant report

Variant	rs73501993
Chromosome Location	chr9:101739134-101739135
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:101737367..101739848-chr9:101767863..101770116,2	K562	blood:
2	chr2:186182448..186185032-chr9:101737617..101739647,2	MCF-7	breast:
3	chr9:101722773..101724944-chr9:101737231..101739969,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10988725	1.00[AMR][1000 genomes]
rs11568792	1.00[AMR][1000 genomes]
rs55773358	1.00[AMR][1000 genomes]
rs55839374	1.00[AMR][1000 genomes]
rs55925225	1.00[AMR][1000 genomes]
rs57927784	1.00[AMR][1000 genomes]
rs58938824	1.00[AMR][1000 genomes]
rs61259934	1.00[AMR][1000 genomes]
rs73503706	1.00[AMR][1000 genomes]
rs73503714	1.00[AMR][1000 genomes]
rs73503762	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv6635	chr9:101728257-101773253	Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101728000-101749400	Weak transcription	Aorta	Aorta
2	chr9:101734800-101740400	Enhancers	Left Ventricle	heart
3	chr9:101736000-101740400	Enhancers	Right Ventricle	heart
4	chr9:101736200-101740200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr9:101737800-101739600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr9:101737800-101739600	Weak transcription	Ovary	ovary
7	chr9:101737800-101739800	Weak transcription	Esophagus	oesophagus
8	chr9:101737800-101740000	Weak transcription	Spleen	Spleen
9	chr9:101737800-101740600	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr9:101737800-101741400	Enhancers	Fetal Muscle Trunk	muscle
11	chr9:101737800-101741400	Enhancers	Fetal Muscle Leg	muscle
12	chr9:101737800-101742800	Enhancers	Adipose Nuclei	Adipose
13	chr9:101737800-101760800	Weak transcription	Gastric	stomach
14	chr9:101738000-101739400	Enhancers	Rectal Smooth Muscle	rectum
15	chr9:101738000-101739600	Weak transcription	Fetal Heart	heart
16	chr9:101738000-101741000	Enhancers	Colon Smooth Muscle	Colon
17	chr9:101738200-101739200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
18	chr9:101738200-101739800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr9:101738200-101740800	Enhancers	Pancreas	Pancrea
20	chr9:101738400-101739600	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr9:101738400-101739600	Weak transcription	Fetal Brain Male	brain
22	chr9:101738400-101740200	Weak transcription	Fetal Brain Female	brain
23	chr9:101738800-101740600	Enhancers	Right Atrium	heart
24	chr9:101739000-101739200	Flanking Active TSS	Stomach Smooth Muscle	stomach
25	chr9:101739000-101739600	Weak transcription	Fetal Stomach	stomach
26	chr9:101739000-101740000	Enhancers	Psoas Muscle	Psoas
27	chr9:101739000-101740400	Enhancers	Lung	lung
28	chr9:101739000-101740800	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr9:101739000-101740800	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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