Variant report

Variant	rs73555351
Chromosome Location	chr6:133970172-133970173
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs55645130	1.00[AMR][1000 genomes]
rs55863046	1.00[AMR][1000 genomes]
rs55963381	1.00[AMR][1000 genomes]
rs56128814	1.00[AMR][1000 genomes]
rs56332553	1.00[AMR][1000 genomes]
rs56353427	1.00[AMR][1000 genomes]
rs56788898	1.00[AMR][1000 genomes]
rs57022180	1.00[AMR][1000 genomes]
rs58069152	1.00[AMR][1000 genomes]
rs60210492	1.00[AMR][1000 genomes]
rs6926676	1.00[AMR][1000 genomes]
rs73546811	1.00[AMR][1000 genomes]
rs73546832	1.00[AMR][1000 genomes]
rs73546898	1.00[AMR][1000 genomes]
rs73548873	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73548875	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73551414	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73553005	1.00[AMR][1000 genomes]
rs73553023	1.00[AMR][1000 genomes]
rs73553034	1.00[AMR][1000 genomes]
rs73553036	1.00[AMR][1000 genomes]
rs73553043	1.00[AMR][1000 genomes]
rs73553058	1.00[AMR][1000 genomes]
rs73553059	1.00[AMR][1000 genomes]
rs73553068	1.00[AMR][1000 genomes]
rs73553070	1.00[AMR][1000 genomes]
rs73553072	1.00[AMR][1000 genomes]
rs73553074	1.00[AMR][1000 genomes]
rs73553075	1.00[AMR][1000 genomes]
rs73553076	1.00[AMR][1000 genomes]
rs73553084	1.00[AMR][1000 genomes]
rs73553088	1.00[AMR][1000 genomes]
rs73555309	1.00[AMR][1000 genomes]
rs73557143	1.00[AMR][1000 genomes]
rs73557178	1.00[AMR][1000 genomes]
rs73557189	1.00[AMR][1000 genomes]
rs73559222	1.00[AMR][1000 genomes]
rs73559294	1.00[AMR][1000 genomes]
rs73776065	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73776709	1.00[AMR][1000 genomes]
rs73776715	1.00[AMR][1000 genomes]
rs7746146	1.00[AMR][1000 genomes]
rs7761492	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019267	chr6:133912335-133975187	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133963000-133970200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:133965400-133970400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr6:133969400-133970200	Enhancers	NHDF-Ad	bronchial
4	chr6:133969600-133970200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:133970000-133970400	Enhancers	Muscle Satellite Cultured Cells	--
6	chr6:133970000-133970600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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