Variant report

Variant	rs73587710
Chromosome Location	chr11:121647738-121647739
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs17125660	0.83[AFR][1000 genomes]
rs17125690	0.90[AFR][1000 genomes]
rs17125810	0.83[AFR][1000 genomes]
rs61703291	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73026663	1.00[AMR][1000 genomes]
rs73603325	0.90[AFR][1000 genomes]
rs73603330	0.90[AFR][1000 genomes]
rs73603356	1.00[AMR][1000 genomes]
rs73603375	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898428	chr11:121568262-121671976	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv832287	chr11:121575379-121722735	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121637600-121648000	Weak transcription	Fetal Muscle Leg	muscle
2	chr11:121645600-121648200	Enhancers	Stomach Smooth Muscle	stomach
3	chr11:121646600-121648000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr11:121647000-121648400	Enhancers	Rectal Smooth Muscle	rectum
5	chr11:121647000-121648600	Enhancers	Fetal Stomach	stomach
6	chr11:121647200-121648400	Enhancers	Muscle Satellite Cultured Cells	--
7	chr11:121647200-121648400	Enhancers	Aorta	Aorta
8	chr11:121647200-121648400	Enhancers	Osteobl	bone
9	chr11:121647200-121648600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr11:121647400-121648200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr11:121647400-121648200	Enhancers	Colon Smooth Muscle	Colon
12	chr11:121647600-121648400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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