Variant report

Variant	rs73601442
Chromosome Location	chr10:4213389-4213390
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11252371	1.00[AMR][1000 genomes]
rs11252375	1.00[AMR][1000 genomes]
rs12240709	1.00[AMR][1000 genomes]
rs12240890	1.00[AMR][1000 genomes]
rs12243522	1.00[AMR][1000 genomes]
rs12253334	1.00[AMR][1000 genomes]
rs57295116	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57782413	0.83[AMR][1000 genomes]
rs73599477	1.00[AMR][1000 genomes]
rs73599479	1.00[AMR][1000 genomes]
rs73601447	0.83[AMR][1000 genomes]
rs73601451	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051297	chr10:3908706-4277678	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4212200-4213400	Enhancers	NHEK	skin
2	chr10:4212400-4213400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr10:4212600-4214000	Enhancers	Placenta Amnion	Placenta Amnion
4	chr10:4213000-4213400	Enhancers	GM12878-XiMat	blood
5	chr10:4213000-4213600	Enhancers	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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