Variant report

Variant	rs73684036
Chromosome Location	chr7:27765773-27765774
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs56024856	1.00[AMR][1000 genomes]
rs57384233	1.00[AMR][1000 genomes]
rs58785596	1.00[AMR][1000 genomes]
rs6952618	1.00[AMR][1000 genomes]
rs6966984	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73684029	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73684034	1.00[AMR][1000 genomes]
rs73684038	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73684041	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73684042	1.00[AMR][1000 genomes]
rs73684046	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73684051	1.00[AMR][1000 genomes]
rs73684059	1.00[AMR][1000 genomes]
rs73684064	1.00[AMR][1000 genomes]
rs7789929	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949025	chr7:27578167-28075172	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27760000-27778800	Weak transcription	HSMMtube	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links