Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NR2F2	chr7:27777015-27777779	MCF-7	breast:	n/a	n/a
2	NR2F2	chr7:27777045-27777651	MCF-7	breast:	n/a	n/a
3	GATA3	chr7:27777096-27777732	MCF-7	breast:	n/a	n/a
4	HDAC2	chr7:27777108-27777720	MCF-7	breast:	n/a	n/a
5	MAFF	chr7:27776831-27777176	K562	blood:	n/a	chr7:27776992-27777010
6	EP300	chr7:27777092-27777722	MCF-7	breast:	n/a	n/a
7	GATA3	chr7:27777021-27777789	MCF-7	breast:	n/a	n/a
8	MAFF	chr7:27776842-27777166	HepG2	liver:	n/a	chr7:27776992-27777010
9	MAFK	chr7:27776838-27777173	HepG2	liver:	n/a	chr7:27776993-27777008 chr7:27776993-27777009 chr7:27776996-27777010 chr7:27776998-27777009 chr7:27776998-27777009 chr7:27776997-27777008

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:27750530..27752720-chr7:27775976..27778781,2	K562	blood:
2	chr7:27699948..27706867-chr7:27775418..27784557,21	K562	blood:

Variant related genes	Relation type
TAX1BP1	TF binding region
ENSG00000106049	Chromatin interaction

rSNPs within LD-proxies of this variant (count:15)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949025	chr7:27578167-28075172	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv1028469	chr7:27767795-27939667	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27760000-27778800	Weak transcription	HSMMtube	muscle
2	chr7:27770000-27778600	Weak transcription	Right Atrium	heart
3	chr7:27772800-27778800	Enhancers	Fetal Intestine Small	intestine
4	chr7:27773600-27778600	Enhancers	Fetal Intestine Large	intestine
5	chr7:27774600-27779000	Weak transcription	Small Intestine	intestine
6	chr7:27774800-27778400	Weak transcription	HUVEC	blood vessel
7	chr7:27775200-27778200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr7:27775200-27778400	Weak transcription	Hela-S3	cervix
9	chr7:27775600-27778600	Weak transcription	A549	lung
10	chr7:27775800-27777600	Weak transcription	Liver	Liver
11	chr7:27775800-27777600	Weak transcription	Duodenum Mucosa	Duodenum
12	chr7:27775800-27778000	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr7:27775800-27778200	Weak transcription	Fetal Lung	lung
14	chr7:27775800-27778800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr7:27775800-27779200	Weak transcription	Gastric	stomach
16	chr7:27775800-27779200	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr7:27776400-27778200	Enhancers	HepG2	liver
18	chr7:27776600-27777600	Enhancers	K562	blood
19	chr7:27776800-27778000	Enhancers	Placenta	Placenta
20	chr7:27776800-27778000	Enhancers	Stomach Mucosa	stomach
21	chr7:27776800-27778600	Enhancers	Rectal Mucosa Donor 31	rectum
22	chr7:27777000-27777400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr7:27777000-27778400	Enhancers	Pancreas	Pancrea

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