Variant report

Variant	rs73691320
Chromosome Location	chr8:68260434-68260435
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:68251600..68254061-chr8:68259167..68260782,2	K562	blood:
2	chr8:68256543..68259078-chr8:68260057..68264184,4	MCF-7	breast:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11987016	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991868	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11996976	1.00[AMR][1000 genomes]
rs16933261	1.00[AMR][1000 genomes]
rs55890263	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56115531	1.00[AMR][1000 genomes]
rs56171881	1.00[AMR][1000 genomes]
rs56322915	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56675350	1.00[AMR][1000 genomes]
rs60435775	1.00[AMR][1000 genomes]
rs6987385	1.00[AMR][1000 genomes]
rs73691318	0.87[AFR][1000 genomes]
rs73691326	1.00[AMR][1000 genomes]
rs73691328	1.00[AMR][1000 genomes]
rs73691329	1.00[AMR][1000 genomes]
rs73693123	1.00[AMR][1000 genomes]
rs73693157	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693186	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7815796	1.00[AMR][1000 genomes]
rs7815839	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7820540	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752263	chr8:68170946-68788493	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	esv1839724	chr8:68195817-68346693	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv1024135	chr8:68235792-68629789	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
4	nsv539642	chr8:68235792-68629789	Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
5	esv2752264	chr8:68244546-68647201	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:68256600-68262400	Weak transcription	Spleen	Spleen
2	chr8:68257200-68261200	Weak transcription	K562	blood
3	chr8:68257200-68261600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr8:68257200-68268600	Weak transcription	Primary T cells from cord blood	blood
5	chr8:68257600-68261200	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr8:68259000-68260600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr8:68259000-68260600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr8:68259000-68260600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:68259000-68261200	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr8:68259200-68260600	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr8:68259400-68261200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr8:68260200-68261800	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr8:68260400-68261000	Weak transcription	Primary neutrophils fromperipheralblood	blood
14	chr8:68260400-68262000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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