Variant report

Variant	rs73701510
Chromosome Location	chr8:103763369-103763370
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:103662668..103675478-chr8:103749144..103775802,85	MCF-7	breast:
2	chr8:103757286..103760071-chr8:103761567..103764534,3	MCF-7	breast:
3	chr8:103760932..103779637-chr8:103816413..103823932,43	MCF-7	breast:
4	chr8:103754951..103756627-chr8:103762242..103765040,3	K562	blood:
5	chr8:103758593..103761250-chr8:103761576..103763589,3	K562	blood:
6	chr8:103760606..103764536-chr8:103766748..103770652,5	MCF-7	breast:
7	chr8:103761840..103763857-chr8:103764935..103767834,2	K562	blood:
8	chr8:103758593..103760761-chr8:103761576..103764976,3	K562	blood:
9	chr8:103761444..103763819-chr8:103803611..103805535,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000155090	Chromatin interaction
ENSG00000253669	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs16869784	1.00[AMR][1000 genomes]
rs16869786	1.00[AMR][1000 genomes]
rs16869789	1.00[AMR][1000 genomes]
rs7007892	1.00[AMR][1000 genomes]
rs73278866	1.00[AMR][1000 genomes]
rs73278868	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	esv1814245	chr8:103735804-103824566	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:103751400-103763800	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr8:103757400-103764000	Enhancers	Placenta	Placenta
3	chr8:103758400-103766000	Weak transcription	Ovary	ovary
4	chr8:103758800-103764200	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr8:103758800-103766000	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr8:103759000-103763400	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr8:103759400-103766800	Weak transcription	Fetal Kidney	kidney
8	chr8:103759600-103764600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr8:103759800-103766200	Weak transcription	Spleen	Spleen
10	chr8:103760000-103766000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr8:103760000-103768400	Weak transcription	Fetal Intestine Large	intestine
12	chr8:103760000-103768800	Weak transcription	Right Ventricle	heart
13	chr8:103761000-103763400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr8:103761200-103763400	Enhancers	Colon Smooth Muscle	Colon
15	chr8:103761200-103766200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr8:103762000-103763400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr8:103762000-103765800	Weak transcription	Lung	lung
18	chr8:103762200-103765600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr8:103762400-103763400	Weak transcription	Fetal Thymus	thymus
20	chr8:103762400-103765000	Weak transcription	Hela-S3	cervix
21	chr8:103762400-103765800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr8:103762400-103765800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr8:103762400-103765800	Weak transcription	Fetal Muscle Leg	muscle
24	chr8:103762400-103765800	Weak transcription	HSMM	muscle
25	chr8:103762400-103766000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr8:103762400-103766000	Weak transcription	NHDF-Ad	bronchial
27	chr8:103762400-103766200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr8:103762400-103770000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr8:103762400-103774200	Weak transcription	Aorta	Aorta
30	chr8:103762600-103763400	Enhancers	K562	blood
31	chr8:103762600-103764400	Weak transcription	Skeletal Muscle Female	skeletal muscle
32	chr8:103762600-103765600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr8:103762600-103765800	Weak transcription	Fetal Stomach	stomach
34	chr8:103762600-103765800	Weak transcription	Placenta Amnion	Placenta Amnion
35	chr8:103762600-103766000	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr8:103762600-103766000	Weak transcription	NHEK	skin
37	chr8:103762600-103766200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr8:103762600-103766200	Weak transcription	Right Atrium	heart
39	chr8:103762600-103768800	Weak transcription	Pancreas	Pancrea
40	chr8:103762800-103765800	Weak transcription	Fetal Muscle Trunk	muscle
41	chr8:103762800-103766000	Weak transcription	Left Ventricle	heart
42	chr8:103762800-103766600	Weak transcription	Duodenum Smooth Muscle	Duodenum
43	chr8:103763000-103763400	Weak transcription	Rectal Smooth Muscle	rectum
44	chr8:103763000-103765800	Weak transcription	Stomach Smooth Muscle	stomach
45	chr8:103763200-103763400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr8:103763200-103763400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
47	chr8:103763200-103763400	Enhancers	Esophagus	oesophagus
48	chr8:103763200-103763400	Enhancers	HMEC	breast
49	chr8:103763200-103763600	ZNF genes & repeats	Fetal Intestine Small	intestine
50	chr8:103763200-103763600	Weak transcription	HSMMtube	muscle

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