Variant report

Variant	rs73715922
Chromosome Location	chr7:103578368-103578369
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10487175	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12154742	0.86[EUR][1000 genomes]
rs16873008	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16873053	0.98[ASN][1000 genomes]
rs17157475	0.94[ASN][1000 genomes]
rs3213725	0.81[AMR][1000 genomes]
rs73715903	0.93[EUR][1000 genomes]
rs73715905	0.93[EUR][1000 genomes]
rs73715906	0.86[EUR][1000 genomes]
rs73715908	0.86[EUR][1000 genomes]
rs73715910	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73715920	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv933391	chr7:103557392-103588539	Weak transcription Flanking Active TSS Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv971218	chr7:103561948-103585213	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103574600-103590200	Weak transcription	K562	blood
2	chr7:103575400-103582800	Weak transcription	HepG2	liver
3	chr7:103577400-103580800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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