Variant report

Variant	rs73715920
Chromosome Location	chr7:103575958-103575959
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10487175	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12154742	0.86[EUR][1000 genomes]
rs16872993	0.81[ASN][1000 genomes]
rs16873008	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16873053	0.95[ASN][1000 genomes]
rs17157475	0.92[ASN][1000 genomes]
rs55833200	0.81[ASN][1000 genomes]
rs58751603	0.81[ASN][1000 genomes]
rs73712300	0.81[ASN][1000 genomes]
rs73712302	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs73715903	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73715905	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73715906	0.86[EUR][1000 genomes]
rs73715908	0.86[EUR][1000 genomes]
rs73715910	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73715922	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv933391	chr7:103557392-103588539	Weak transcription Flanking Active TSS Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv971218	chr7:103561948-103585213	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103574600-103590200	Weak transcription	K562	blood
2	chr7:103575400-103582800	Weak transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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