Variant report
Variant | rs73742250 |
---|---|
Chromosome Location | chr6:23325396-23325397 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:23324427..23327416-chr6:23329327..23331380,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs55838144 | 0.92[AFR][1000 genomes] |
rs6900597 | 1.00[EUR][1000 genomes] |
rs73739244 | 1.00[EUR][1000 genomes] |
rs73742212 | 1.00[EUR][1000 genomes] |
rs73742214 | 1.00[EUR][1000 genomes] |
rs73742216 | 1.00[EUR][1000 genomes] |
rs73742218 | 1.00[EUR][1000 genomes] |
rs73742248 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73742252 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73742253 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7739080 | 1.00[EUR][1000 genomes] |
rs7751274 | 1.00[EUR][1000 genomes] |
rs7751670 | 1.00[EUR][1000 genomes] |
rs7751674 | 1.00[EUR][1000 genomes] |
rs7751943 | 1.00[EUR][1000 genomes] |
rs7772937 | 1.00[EUR][1000 genomes] |
rs9466731 | 1.00[EUR][1000 genomes] |
rs9466736 | 1.00[EUR][1000 genomes] |
rs9466737 | 1.00[EUR][1000 genomes] |
rs9466738 | 1.00[EUR][1000 genomes] |
rs9466739 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv601123 | chr6:23260824-23358239 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
2 | nsv830607 | chr6:23302325-23446497 | Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:23324800-23326000 | Enhancers | Fetal Heart | heart |