Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:23324427..23327416-chr6:23329327..23331380,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs55838144	0.92[AFR][1000 genomes]
rs6900597	1.00[EUR][1000 genomes]
rs73739244	1.00[EUR][1000 genomes]
rs73742212	1.00[EUR][1000 genomes]
rs73742214	1.00[EUR][1000 genomes]
rs73742216	1.00[EUR][1000 genomes]
rs73742218	1.00[EUR][1000 genomes]
rs73742248	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73742250	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73742253	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7739080	1.00[EUR][1000 genomes]
rs7751274	1.00[EUR][1000 genomes]
rs7751670	1.00[EUR][1000 genomes]
rs7751674	1.00[EUR][1000 genomes]
rs7751943	1.00[EUR][1000 genomes]
rs7772937	1.00[EUR][1000 genomes]
rs9466731	1.00[EUR][1000 genomes]
rs9466736	1.00[EUR][1000 genomes]
rs9466737	1.00[EUR][1000 genomes]
rs9466738	1.00[EUR][1000 genomes]
rs9466739	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601123	chr6:23260824-23358239	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv830607	chr6:23302325-23446497	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:23324800-23326000	Enhancers	Fetal Heart	heart
2	chr6:23325600-23326200	Enhancers	Fetal Muscle Leg	muscle

Quick Search: