Variant report
Variant | rs73772973 |
---|---|
Chromosome Location | chr6:133174480-133174481 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
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No data |
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Variant related genes | Relation type |
---|---|
ENSG00000112306 | Chromatin interaction |
ENSG00000206754 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs11961405 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11964612 | 1.00[AMR][1000 genomes] |
rs11966336 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11966419 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs55634221 | 1.00[AMR][1000 genomes] |
rs55757918 | 1.00[AMR][1000 genomes] |
rs55927079 | 1.00[AMR][1000 genomes] |
rs55937207 | 1.00[AMR][1000 genomes] |
rs56195831 | 1.00[AMR][1000 genomes] |
rs56253921 | 1.00[AMR][1000 genomes] |
rs56272102 | 1.00[AMR][1000 genomes] |
rs56321429 | 1.00[AMR][1000 genomes] |
rs56335598 | 1.00[AMR][1000 genomes] |
rs56347679 | 1.00[AMR][1000 genomes] |
rs57507997 | 1.00[AMR][1000 genomes] |
rs58066256 | 1.00[AMR][1000 genomes] |
rs58267486 | 1.00[AMR][1000 genomes] |
rs58879755 | 1.00[AMR][1000 genomes] |
rs58969189 | 1.00[AMR][1000 genomes] |
rs59494178 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs60308475 | 1.00[AMR][1000 genomes] |
rs60864827 | 1.00[AMR][1000 genomes] |
rs61588260 | 1.00[AMR][1000 genomes] |
rs73772954 | 1.00[AMR][1000 genomes] |
rs73772961 | 1.00[AMR][1000 genomes] |
rs73772965 | 1.00[AMR][1000 genomes] |
rs73772966 | 1.00[AMR][1000 genomes] |
rs73772969 | 1.00[AMR][1000 genomes] |
rs73772971 | 1.00[AMR][1000 genomes] |
rs73772972 | 1.00[AMR][1000 genomes] |
rs73772974 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73772975 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73772978 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73772979 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73772980 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73772981 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73772982 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73772984 | 1.00[AMR][1000 genomes] |
rs73772985 | 1.00[AMR][1000 genomes] |
rs73772986 | 1.00[AMR][1000 genomes] |
rs73772987 | 1.00[AMR][1000 genomes] |
rs73772988 | 1.00[AMR][1000 genomes] |
rs73772990 | 1.00[AMR][1000 genomes] |
rs73772995 | 1.00[AMR][1000 genomes] |
rs73772997 | 1.00[AMR][1000 genomes] |
rs73772998 | 1.00[AMR][1000 genomes] |
rs73773001 | 1.00[AMR][1000 genomes] |
rs73777004 | 1.00[AMR][1000 genomes] |
rs7743148 | 1.00[AMR][1000 genomes] |
rs7754361 | 1.00[AMR][1000 genomes] |
rs7754746 | 1.00[AMR][1000 genomes] |
rs7755395 | 1.00[AMR][1000 genomes] |
rs7763296 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7768374 | 1.00[AMR][1000 genomes] |
rs7768800 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv532069 | chr6:132776411-133462292 | Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 90 gene(s) | inside rSNPs | diseases |
2 | nsv1015742 | chr6:132933666-133285852 | Active TSS Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 71 gene(s) | inside rSNPs | diseases |
No data |