Variant report

Variant	rs73776049
Chromosome Location	chr6:133891103-133891104
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:133889734..133891144-chr6:134158380..134159654,7	MCF-7	breast:

rs_ID	r²[population]
rs10046192	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10046194	1.00[ASN][1000 genomes]
rs10046269	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11969406	1.00[EUR][1000 genomes]
rs11969455	1.00[EUR][1000 genomes]
rs17062425	1.00[EUR][1000 genomes]
rs17062451	1.00[EUR][1000 genomes]
rs17062457	1.00[EUR][1000 genomes]
rs3777820	1.00[EUR][1000 genomes]
rs58720665	1.00[EUR][1000 genomes]
rs6905230	1.00[EUR][1000 genomes]
rs6912096	1.00[EUR][1000 genomes]
rs6912431	0.96[ASN][1000 genomes]
rs6912460	0.83[ASN][1000 genomes]
rs6919264	1.00[EUR][1000 genomes]
rs73776051	1.00[ASN][1000 genomes]
rs7750331	1.00[EUR][1000 genomes]
rs7750637	1.00[EUR][1000 genomes]
rs7754602	1.00[EUR][1000 genomes]
rs7755047	1.00[EUR][1000 genomes]
rs7775362	1.00[EUR][1000 genomes]
rs9483589	0.81[ASN][1000 genomes]
rs9493639	0.81[ASN][1000 genomes]
rs9493641	0.81[ASN][1000 genomes]

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133890000-133891200	Active TSS	iPS-20b Cell Line	embryonic stem cell
2	chr6:133890200-133891200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
3	chr6:133890400-133891200	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
4	chr6:133890600-133891200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:133890600-133891200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr6:133890800-133891200	Enhancers	Pancreatic Islets	Pancreatic Islet
7	chr6:133890800-133891200	Enhancers	Fetal Stomach	stomach
8	chr6:133890800-133891200	Enhancers	HMEC	breast
9	chr6:133890800-133891200	Enhancers	NHEK	skin
10	chr6:133890800-133891200	Enhancers	NHLF	lung
11	chr6:133891000-133891200	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
12	chr6:133891000-133891200	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr6:133891000-133891200	Enhancers	HUES64 Cell Line	embryonic stem cell
14	chr6:133891000-133891200	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr6:133891000-133891200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr6:133891000-133891200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr6:133891000-133891200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr6:133891000-133891200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr6:133891000-133891200	Enhancers	Fetal Kidney	kidney
20	chr6:133891000-133891200	Enhancers	Skeletal Muscle Male	skeletal muscle
21	chr6:133891000-133891200	Flanking Active TSS	A549	lung
22	chr6:133891000-133891200	Enhancers	Hela-S3	cervix
23	chr6:133891000-133891200	Enhancers	HSMM	muscle
24	chr6:133891000-133891200	Enhancers	NHDF-Ad	bronchial
25	chr6:133891000-133891200	Enhancers	Osteobl	bone
26	chr6:133891000-133891400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr6:133891000-133891400	Enhancers	Fetal Lung	lung
28	chr6:133891000-133892000	Weak transcription	Aorta	Aorta
29	chr6:133891000-133893000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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