Variant report

Variant	rs73823301
Chromosome Location	chr4:62920623-62920624
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs17082578	1.00[AMR][1000 genomes]
rs35637502	1.00[AMR][1000 genomes]
rs55752011	1.00[AMR][1000 genomes]
rs55897724	1.00[AMR][1000 genomes]
rs59144223	1.00[AMR][1000 genomes]
rs73823288	1.00[AMR][1000 genomes]
rs73823289	1.00[AMR][1000 genomes]
rs73823290	1.00[AMR][1000 genomes]
rs73823293	1.00[AMR][1000 genomes]
rs73823295	1.00[AMR][1000 genomes]
rs73823297	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73823298	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73823300	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73825603	1.00[AMR][1000 genomes]
rs73825622	1.00[AMR][1000 genomes]
rs73825635	1.00[AMR][1000 genomes]
rs73825644	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012574	chr4:62844264-62954187	Enhancers Weak transcription Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:62895000-62926000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:62920000-62924600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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