The 2.0 version of rSNPBase

Variant report

Variant rs73825125
Chromosome Location chr3:28364670-28364671
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:28314400-28365400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr3:28317600-28380000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr3:28317600-28389400 Weak transcription Esophagus oesophagus
4 chr3:28326400-28365400 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr3:28332800-28365200 Weak transcription HSMMtube muscle
6 chr3:28332800-28365400 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr3:28337200-28365200 Weak transcription Stomach Smooth Muscle stomach
8 chr3:28343800-28383800 Weak transcription Aorta Aorta
9 chr3:28348600-28365200 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr3:28349000-28365400 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr3:28349400-28365600 Weak transcription Psoas Muscle Psoas
12 chr3:28349600-28365400 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr3:28349800-28389400 Weak transcription Gastric stomach
14 chr3:28350000-28376800 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr3:28350400-28365400 Weak transcription Colon Smooth Muscle Colon
16 chr3:28351200-28366600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr3:28351400-28365600 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr3:28351400-28366800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr3:28354800-28365600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr3:28356800-28376800 Weak transcription Ovary ovary
21 chr3:28357200-28365600 Weak transcription Colonic Mucosa Colon
22 chr3:28357400-28366200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr3:28357400-28366600 Weak transcription Fetal Brain Male brain
24 chr3:28357600-28365600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr3:28357600-28370400 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr3:28357800-28365600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr3:28358400-28366600 Weak transcription Fetal Heart heart
28 chr3:28358600-28365000 Weak transcription Hela-S3 cervix
29 chr3:28358600-28365400 Weak transcription Primary B cells from peripheral blood blood
30 chr3:28358600-28365600 Weak transcription H1 Cell Line embryonic stem cell
31 chr3:28358600-28367000 Weak transcription HMEC breast
32 chr3:28358600-28386400 Weak transcription Thymus Thymus
33 chr3:28358800-28364800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr3:28358800-28365600 Weak transcription Fetal Muscle Leg muscle
35 chr3:28358800-28389000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr3:28359000-28365400 Weak transcription Muscle Satellite Cultured Cells --
37 chr3:28359000-28365400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr3:28359000-28365600 Weak transcription Pancreas Pancrea
39 chr3:28359200-28366600 Strong transcription Dnd41 blood
40 chr3:28359400-28366600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr3:28359600-28365400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr3:28359600-28365800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr3:28359600-28367600 Strong transcription Monocytes-CD14+_RO01746 blood
44 chr3:28359600-28377200 Weak transcription Brain Anterior Caudate brain
45 chr3:28359800-28364800 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr3:28360000-28366800 Weak transcription Right Ventricle heart
47 chr3:28360000-28368400 Strong transcription Fetal Muscle Trunk muscle
48 chr3:28360200-28367600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr3:28360200-28368200 Strong transcription Rectal Mucosa Donor 31 rectum
50 chr3:28360200-28368400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015