The 2.0 version of rSNPBase

Variant report

Variant rs73831481
Chromosome Location chr3:47196880-47196881
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:47165800-47197000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:47166000-47200800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr3:47166000-47201200 Weak transcription Fetal Muscle Leg muscle
4 chr3:47166000-47204600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:47166200-47197200 Weak transcription Aorta Aorta
6 chr3:47166200-47200600 Weak transcription Hela-S3 cervix
7 chr3:47166600-47204200 Weak transcription Fetal Muscle Trunk muscle
8 chr3:47167400-47202400 Weak transcription HSMM muscle
9 chr3:47175800-47200400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr3:47182600-47200800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr3:47182800-47198200 Weak transcription Primary B cells from cord blood blood
12 chr3:47183600-47200800 Weak transcription Brain Cingulate Gyrus brain
13 chr3:47183600-47202200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr3:47183800-47198000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr3:47183800-47202200 Weak transcription NHEK skin
16 chr3:47183800-47203000 Weak transcription Colonic Mucosa Colon
17 chr3:47184000-47197000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr3:47184400-47198400 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr3:47184600-47198000 Weak transcription Thymus Thymus
20 chr3:47184600-47202200 Weak transcription Esophagus oesophagus
21 chr3:47184800-47197000 Weak transcription Gastric stomach
22 chr3:47184800-47199600 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr3:47184800-47199800 Weak transcription Fetal Intestine Small intestine
24 chr3:47186800-47197000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr3:47187400-47197200 Weak transcription Right Atrium heart
26 chr3:47188400-47200800 Weak transcription Fetal Stomach stomach
27 chr3:47188600-47202000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr3:47190000-47200400 Enhancers Primary T helper cells PMA-I stimulated --
29 chr3:47191200-47198000 Weak transcription Right Ventricle heart
30 chr3:47191200-47198000 Weak transcription Small Intestine intestine
31 chr3:47191200-47200600 Weak transcription Stomach Smooth Muscle stomach
32 chr3:47191200-47202800 Weak transcription HMEC breast
33 chr3:47191400-47198000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr3:47191400-47201000 Weak transcription Rectal Smooth Muscle rectum
35 chr3:47192000-47197000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr3:47192200-47197400 Weak transcription Colon Smooth Muscle Colon
37 chr3:47192200-47198000 Weak transcription Duodenum Mucosa Duodenum
38 chr3:47192200-47200400 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr3:47192200-47202000 Weak transcription Fetal Lung lung
40 chr3:47192400-47198400 Weak transcription Stomach Mucosa stomach
41 chr3:47193400-47198000 Enhancers Primary T helper cells fromperipheralblood blood
42 chr3:47193400-47198400 Weak transcription Lung lung
43 chr3:47194000-47200800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr3:47194200-47200400 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr3:47194400-47197000 Weak transcription Adipose Nuclei Adipose
46 chr3:47194400-47197600 Weak transcription Osteobl bone
47 chr3:47194400-47197800 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr3:47194400-47197800 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr3:47194400-47198400 Weak transcription Ovary ovary
50 chr3:47194400-47200600 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015