Variant report

Variant	rs73862311
Chromosome Location	chr4:166281459-166281460
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10222790	1.00[EUR][1000 genomes]
rs1370688	1.00[EUR][1000 genomes]
rs17046199	1.00[EUR][1000 genomes]
rs28373383	1.00[EUR][1000 genomes]
rs28540812	1.00[EUR][1000 genomes]
rs28547097	1.00[EUR][1000 genomes]
rs56207699	1.00[EUR][1000 genomes]
rs57198322	1.00[EUR][1000 genomes]
rs57508190	1.00[EUR][1000 genomes]
rs60786866	1.00[EUR][1000 genomes]
rs73860770	1.00[EUR][1000 genomes]
rs73860771	1.00[EUR][1000 genomes]
rs73860772	1.00[EUR][1000 genomes]
rs73860783	1.00[EUR][1000 genomes]
rs73860785	1.00[EUR][1000 genomes]
rs73860786	1.00[EUR][1000 genomes]
rs73860789	1.00[EUR][1000 genomes]
rs73860791	1.00[EUR][1000 genomes]
rs73860793	1.00[EUR][1000 genomes]
rs73860794	1.00[EUR][1000 genomes]
rs73860795	1.00[EUR][1000 genomes]
rs73860796	1.00[EUR][1000 genomes]
rs73860797	1.00[EUR][1000 genomes]
rs73861021	1.00[EUR][1000 genomes]
rs73863706	1.00[EUR][1000 genomes]
rs73863707	1.00[EUR][1000 genomes]
rs73863709	1.00[EUR][1000 genomes]
rs73863713	1.00[EUR][1000 genomes]
rs7680390	1.00[EUR][1000 genomes]
rs7698358	1.00[EUR][1000 genomes]
rs7698407	1.00[EUR][1000 genomes]
rs7699952	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1847399	chr4:166259587-166284836	Strong transcription Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166277600-166285400	Weak transcription	HepG2	liver
2	chr4:166278200-166282800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr4:166279200-166281800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr4:166279800-166281600	Enhancers	HMEC	breast
5	chr4:166280200-166281600	Enhancers	HSMMtube	muscle
6	chr4:166280200-166284800	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr4:166280400-166281600	Enhancers	Hela-S3	cervix
8	chr4:166280400-166281800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
9	chr4:166280400-166282000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr4:166280400-166282400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:166280800-166281600	Bivalent Enhancer	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr4:166280800-166281600	Enhancers	Fetal Lung	lung
13	chr4:166281000-166282000	Enhancers	Adipose Nuclei	Adipose
14	chr4:166281000-166282000	Enhancers	NHDF-Ad	bronchial
15	chr4:166281000-166282600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr4:166281200-166281600	Enhancers	NHLF	lung
17	chr4:166281200-166282000	Bivalent Enhancer	Osteobl	bone
18	chr4:166281400-166281600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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