Variant report

Variant	rs73860783
Chromosome Location	chr4:166381187-166381188
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:166380861..166382670-chr4:166385942..166388896,2	MCF-7	breast:
2	chr4:166032514..166034118-chr4:166380373..166382372,2	K562	blood:
3	chr4:166364459..166365959-chr4:166381154..166383364,2	K562	blood:

Variant related genes	Relation type
ENSG00000170088	Chromatin interaction

rs_ID	r²[population]
rs10213568	1.00[EUR][1000 genomes]
rs10222790	1.00[EUR][1000 genomes]
rs1370688	1.00[EUR][1000 genomes]
rs17046199	1.00[EUR][1000 genomes]
rs28373383	1.00[EUR][1000 genomes]
rs28540812	1.00[EUR][1000 genomes]
rs28547097	1.00[EUR][1000 genomes]
rs56050257	1.00[EUR][1000 genomes]
rs56081722	1.00[EUR][1000 genomes]
rs56207699	1.00[EUR][1000 genomes]
rs57198322	1.00[EUR][1000 genomes]
rs57395378	1.00[EUR][1000 genomes]
rs57508190	1.00[EUR][1000 genomes]
rs60786866	1.00[EUR][1000 genomes]
rs73860770	1.00[EUR][1000 genomes]
rs73860771	1.00[EUR][1000 genomes]
rs73860772	1.00[EUR][1000 genomes]
rs73860785	1.00[EUR][1000 genomes]
rs73860786	1.00[EUR][1000 genomes]
rs73860789	1.00[EUR][1000 genomes]
rs73860791	1.00[EUR][1000 genomes]
rs73860793	1.00[EUR][1000 genomes]
rs73860794	1.00[EUR][1000 genomes]
rs73860795	1.00[EUR][1000 genomes]
rs73860796	1.00[EUR][1000 genomes]
rs73860797	1.00[EUR][1000 genomes]
rs73861021	1.00[EUR][1000 genomes]
rs73861075	1.00[EUR][1000 genomes]
rs73862311	1.00[EUR][1000 genomes]
rs73863706	1.00[EUR][1000 genomes]
rs73863707	1.00[EUR][1000 genomes]
rs73863709	1.00[EUR][1000 genomes]
rs73863713	1.00[EUR][1000 genomes]
rs7673723	1.00[EUR][1000 genomes]
rs7680390	1.00[EUR][1000 genomes]
rs7699952	1.00[EUR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166362200-166381600	Weak transcription	Fetal Stomach	stomach
2	chr4:166362400-166381600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr4:166362400-166382400	Weak transcription	Aorta	Aorta
4	chr4:166362400-166384600	Weak transcription	Brain Cingulate Gyrus	brain
5	chr4:166376000-166382600	Weak transcription	HepG2	liver
6	chr4:166378800-166386800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr4:166379000-166382800	Weak transcription	Fetal Lung	lung
8	chr4:166379000-166385000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr4:166379400-166382400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr4:166379400-166385600	Weak transcription	Brain Hippocampus Middle	brain
11	chr4:166379600-166381400	Weak transcription	Fetal Brain Female	brain
12	chr4:166380000-166384400	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr4:166380000-166388800	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr4:166380200-166381200	Weak transcription	Fetal Brain Male	brain
15	chr4:166380200-166382400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr4:166380200-166382400	Weak transcription	Adipose Nuclei	Adipose
17	chr4:166380200-166384000	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr4:166380200-166386200	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr4:166380200-166390200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr4:166380400-166381400	Weak transcription	Pancreatic Islets	Pancreatic Islet
21	chr4:166380400-166381400	Weak transcription	HSMMtube	muscle
22	chr4:166380400-166382600	Weak transcription	Brain Anterior Caudate	brain
23	chr4:166380800-166381800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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