Variant report

Variant	rs73865015
Chromosome Location	chr4:152700172-152700173
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs56237971	1.00[AFR][1000 genomes]
rs60259671	0.90[AFR][1000 genomes]
rs60684121	1.00[AFR][1000 genomes]
rs73862265	1.00[AFR][1000 genomes]
rs73862266	1.00[AFR][1000 genomes]
rs73865003	1.00[AFR][1000 genomes]
rs73865010	1.00[AFR][1000 genomes]
rs73865013	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432644	chr4:152635395-153023402	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv4552	chr4:152681211-152702457	Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:152699200-152700200	Enhancers	Left Ventricle	heart
2	chr4:152699800-152700400	Enhancers	Fetal Heart	heart
3	chr4:152700000-152700400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr4:152700000-152700600	Enhancers	Duodenum Mucosa	Duodenum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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