Variant report

Variant rs73904109
Chromosome Location chr20:22556892-22556893
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:22552000-22558200 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
2 chr20:22552200-22557000 Enhancers Stomach Mucosa stomach
3 chr20:22555200-22557000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr20:22555200-22557400 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
5 chr20:22555200-22557400 Flanking Active TSS Liver Liver
6 chr20:22555200-22557400 Enhancers A549 lung
7 chr20:22555200-22558600 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
8 chr20:22555200-22560400 Bivalent Enhancer H1 Cell Line embryonic stem cell
9 chr20:22555400-22558800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
10 chr20:22555400-22559200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
11 chr20:22555600-22557200 Bivalent Enhancer H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr20:22555600-22558200 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
13 chr20:22555600-22559200 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr20:22555600-22559200 Bivalent Enhancer hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr20:22555800-22557000 Bivalent Enhancer Fetal Thymus thymus
16 chr20:22555800-22557400 Bivalent Enhancer Primary T cells from cord blood blood
17 chr20:22555800-22557400 Flanking Active TSS HepG2 liver
18 chr20:22556200-22557000 Bivalent Enhancer NHEK skin
19 chr20:22556200-22557200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
20 chr20:22556200-22557800 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr20:22556400-22557400 Bivalent/Poised TSS Duodenum Mucosa Duodenum
22 chr20:22556400-22557400 ZNF genes & repeats GM12878-XiMat blood
23 chr20:22556600-22557000 Bivalent Enhancer Fetal Lung lung
24 chr20:22556600-22558000 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
25 chr20:22556800-22557000 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
26 chr20:22556800-22557000 Flanking Active TSS Pancreas Pancrea
27 chr20:22556800-22557000 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
28 chr20:22556800-22557200 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
29 chr20:22556800-22558000 Bivalent/Poised TSS Fetal Intestine Small intestine
30 chr20:22556800-22559200 Active TSS Gastric stomach
31 chr20:22556800-22559400 Bivalent/Poised TSS Fetal Stomach stomach
32 chr20:22556800-22560800 Active TSS Pancreatic Islets Pancreatic Islet

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