The 2.0 version of rSNPBase

Variant report

Variant rs73943777
Chromosome Location chr2:86070374-86070375
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86039800-86074800 Weak transcription Aorta Aorta
2 chr2:86055000-86070800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr2:86055000-86071200 Weak transcription Psoas Muscle Psoas
4 chr2:86055000-86080000 Weak transcription Duodenum Mucosa Duodenum
5 chr2:86055200-86070800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr2:86055200-86073200 Weak transcription NHDF-Ad bronchial
7 chr2:86055200-86078200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr2:86055200-86080400 Weak transcription Colonic Mucosa Colon
9 chr2:86055400-86071200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr2:86055600-86071400 Weak transcription Pancreas Pancrea
11 chr2:86057200-86071200 Weak transcription Primary hematopoietic stem cells blood
12 chr2:86059400-86078400 Weak transcription Rectal Smooth Muscle rectum
13 chr2:86060600-86070400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr2:86060600-86074200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr2:86060800-86071200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr2:86061000-86070800 Weak transcription Osteobl bone
17 chr2:86062000-86074400 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr2:86063200-86070800 Weak transcription Fetal Stomach stomach
19 chr2:86063800-86080200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr2:86064200-86070800 Weak transcription Brain Germinal Matrix brain
21 chr2:86064200-86070800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr2:86064800-86070800 Weak transcription NH-A brain
23 chr2:86065000-86073400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr2:86065000-86075400 Strong transcription Brain Hippocampus Middle brain
25 chr2:86065000-86075400 Strong transcription Fetal Muscle Trunk muscle
26 chr2:86065000-86075800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:86065000-86078400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr2:86065200-86071200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr2:86065200-86078400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr2:86065200-86080000 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr2:86065400-86071200 Strong transcription Cortex derived primary cultured neurospheres brain
32 chr2:86065400-86079400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr2:86065600-86078600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr2:86065800-86070800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr2:86065800-86071200 Weak transcription HSMM muscle
36 chr2:86065800-86075400 Strong transcription Liver Liver
37 chr2:86065800-86078200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:86065800-86078400 Strong transcription Brain Inferior Temporal Lobe brain
39 chr2:86066000-86070800 Weak transcription Fetal Intestine Small intestine
40 chr2:86066000-86075600 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr2:86066000-86080600 Weak transcription Small Intestine intestine
42 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr2:86066200-86081400 Weak transcription Right Ventricle heart
44 chr2:86066400-86071600 Strong transcription Primary monocytes fromperipheralblood blood
45 chr2:86066400-86091400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr2:86066600-86073800 Weak transcription Placenta Amnion Placenta Amnion
47 chr2:86066800-86070800 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr2:86066800-86072000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr2:86066800-86072000 Strong transcription NHEK skin
50 chr2:86067000-86071200 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015