The 2.0 version of rSNPBase

Variant report

Variant rs74012431
Chromosome Location chr15:49898193-49898194
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49893200-49906800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr15:49894600-49902800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr15:49895600-49911400 Weak transcription Psoas Muscle Psoas
4 chr15:49895800-49907000 Weak transcription HSMM muscle
5 chr15:49896000-49912200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr15:49896200-49906600 Weak transcription Fetal Lung lung
7 chr15:49896400-49901000 Weak transcription Gastric stomach
8 chr15:49896600-49906200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr15:49896600-49912000 Weak transcription Brain Cingulate Gyrus brain
10 chr15:49896800-49907000 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr15:49896800-49912000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr15:49897000-49911400 Weak transcription Stomach Smooth Muscle stomach
13 chr15:49897200-49898200 ZNF genes & repeats Fetal Intestine Small intestine
14 chr15:49897200-49898200 ZNF genes & repeats Thymus Thymus
15 chr15:49897200-49907000 Weak transcription Liver Liver
16 chr15:49897400-49898200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr15:49897400-49898200 ZNF genes & repeats Fetal Muscle Leg muscle
18 chr15:49897400-49898200 ZNF genes & repeats Fetal Stomach stomach
19 chr15:49897400-49898200 ZNF genes & repeats Pancreas Pancrea
20 chr15:49897400-49898400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
21 chr15:49897400-49898600 Strong transcription Primary T cells from cord blood blood
22 chr15:49897400-49898800 Strong transcription Skeletal Muscle Female skeletal muscle
23 chr15:49897400-49899800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr15:49897600-49898200 Bivalent Enhancer Primary T cells fromperipheralblood blood
25 chr15:49897600-49898200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
26 chr15:49897600-49898200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr15:49897600-49898200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
28 chr15:49897600-49898200 ZNF genes & repeats Aorta Aorta
29 chr15:49897600-49898200 ZNF genes & repeats Esophagus oesophagus
30 chr15:49897600-49898200 ZNF genes & repeats Fetal Intestine Large intestine
31 chr15:49897600-49898200 ZNF genes & repeats Lung lung
32 chr15:49897600-49898400 Strong transcription Brain Hippocampus Middle brain
33 chr15:49897600-49898600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr15:49897600-49899000 Strong transcription Ovary ovary
35 chr15:49897600-49899000 Strong transcription Skeletal Muscle Male skeletal muscle
36 chr15:49897600-49906200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr15:49897600-49906400 Weak transcription Primary B cells from cord blood blood
38 chr15:49897800-49898200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr15:49897800-49898200 ZNF genes & repeats Spleen Spleen
40 chr15:49897800-49898600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr15:49897800-49899000 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr15:49897800-49899800 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr15:49897800-49900000 Weak transcription Primary B cells from peripheral blood blood
44 chr15:49897800-49906800 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr15:49897800-49907000 Weak transcription Left Ventricle heart
46 chr15:49897800-49911800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr15:49898000-49898200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
48 chr15:49898000-49898400 Strong transcription Right Ventricle heart
49 chr15:49898000-49903800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr15:49898000-49906600 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015