The 2.0 version of rSNPBase

Variant report

Variant rs74015329
Chromosome Location chr15:56165686-56165687
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56148200-56174400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr15:56149000-56177600 Weak transcription Spleen Spleen
3 chr15:56152800-56174600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr15:56153000-56167400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr15:56153000-56174000 Weak transcription Primary hematopoietic stem cells blood
6 chr15:56153000-56174400 Weak transcription HSMMtube muscle
7 chr15:56153000-56174800 Weak transcription Fetal Intestine Small intestine
8 chr15:56153000-56176400 Weak transcription Esophagus oesophagus
9 chr15:56153600-56178600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr15:56155400-56174800 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr15:56155400-56175600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr15:56158200-56176400 Weak transcription Left Ventricle heart
13 chr15:56161200-56174400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr15:56161200-56179800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr15:56161400-56174400 Weak transcription NHEK skin
16 chr15:56161400-56174600 Weak transcription Primary T cells from cord blood blood
17 chr15:56161400-56177400 Weak transcription Duodenum Mucosa Duodenum
18 chr15:56161800-56174200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr15:56163400-56174600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr15:56163600-56174400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr15:56164600-56165800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr15:56164600-56165800 Flanking Active TSS HUVEC blood vessel
23 chr15:56164800-56165800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr15:56164800-56165800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr15:56164800-56165800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr15:56164800-56165800 Flanking Active TSS Hela-S3 cervix
27 chr15:56164800-56165800 Flanking Active TSS Osteobl bone
28 chr15:56164800-56166000 Enhancers NH-A brain
29 chr15:56165000-56165800 Active TSS Ovary ovary
30 chr15:56165000-56166400 Active TSS A549 lung
31 chr15:56165000-56171200 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr15:56165200-56165800 Flanking Active TSS Muscle Satellite Cultured Cells --
33 chr15:56165200-56174200 Weak transcription Liver Liver
34 chr15:56165200-56174200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr15:56165400-56165800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr15:56165400-56166000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr15:56165400-56166800 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr15:56165600-56166600 Weak transcription Psoas Muscle Psoas
39 chr15:56165600-56169400 Weak transcription HSMM muscle
40 chr15:56165600-56171200 Weak transcription Aorta Aorta
41 chr15:56165600-56174800 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015