Variant report

Variant	rs74056669
Chromosome Location	chr14:65597084-65597085
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17093570	1.00[AMR][1000 genomes]
rs59724943	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056659	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056671	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056672	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056676	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056679	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	esv1833060	chr14:65594460-65607642	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65596800-65597200	Enhancers	Rectal Mucosa Donor 31	rectum
2	chr14:65596800-65602600	Enhancers	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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