Variant report

Variant	rs74056679
Chromosome Location	chr14:65608381-65608382
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17093570	1.00[AMR][1000 genomes]
rs59724943	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056659	1.00[AMR][1000 genomes]
rs74056669	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056671	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056672	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74056676	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	esv3530651	chr14:65604499-65609897	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3529456	chr14:65605199-65609197	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3529457	chr14:65605199-65609197	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3426379	chr14:65605749-65609447	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65605000-65609200	Weak transcription	Osteobl	bone
2	chr14:65605400-65608800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr14:65605400-65609000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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