Variant report

Variant	rs74069972
Chromosome Location	chr14:84948724-84948725
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs55798405	0.89[AFR][1000 genomes]
rs56014851	0.94[AFR][1000 genomes]
rs58321795	1.00[AFR][1000 genomes]
rs58840513	1.00[AFR][1000 genomes]
rs59498545	1.00[AFR][1000 genomes]
rs59592595	1.00[AFR][1000 genomes]
rs72687292	0.89[AFR][1000 genomes]
rs72687298	0.89[AFR][1000 genomes]
rs74069976	1.00[AFR][1000 genomes]
rs74069998	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751288	chr14:84815330-85704047	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84947800-84949000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr14:84947800-84951600	Enhancers	Muscle Satellite Cultured Cells	--
3	chr14:84948200-84949400	Enhancers	HUVEC	blood vessel
4	chr14:84948200-84950000	Enhancers	HSMM	muscle
5	chr14:84948200-84950200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr14:84948400-84949200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr14:84948400-84949400	Weak transcription	Brain Germinal Matrix	brain
8	chr14:84948400-84949800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr14:84948400-84950600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr14:84948400-84950600	Enhancers	NH-A	brain
11	chr14:84948400-84951600	Enhancers	NHEK	skin
12	chr14:84948600-84949400	Enhancers	Hela-S3	cervix
13	chr14:84948600-84949800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr14:84948600-84950000	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr14:84948600-84950000	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr14:84948600-84950400	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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