Variant report

Variant	rs74069998
Chromosome Location	chr14:84974252-84974253
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs55798405	0.89[AFR][1000 genomes]
rs56014851	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58321795	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58840513	1.00[AFR][1000 genomes]
rs59498545	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59592595	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72687292	0.89[AFR][1000 genomes]
rs72687298	0.89[AFR][1000 genomes]
rs74069972	1.00[AFR][1000 genomes]
rs74069976	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74072237	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751288	chr14:84815330-85704047	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84973200-84983800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr14:84973600-84978800	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr14:84973800-84974400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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