The 2.0 version of rSNPBase

Variant report

Variant rs74074170
Chromosome Location chr13:48844758-48844759
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48828600-48845800 Weak transcription Stomach Mucosa stomach
2 chr13:48832800-48845200 Weak transcription Fetal Intestine Small intestine
3 chr13:48833800-48851600 Weak transcription Fetal Heart heart
4 chr13:48835800-48849400 Weak transcription NHLF lung
5 chr13:48837800-48848000 Weak transcription A549 lung
6 chr13:48837800-48848600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr13:48837800-48848600 Weak transcription Fetal Brain Female brain
8 chr13:48837800-48853000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr13:48837800-48856400 Weak transcription Colon Smooth Muscle Colon
10 chr13:48838000-48845200 Weak transcription Brain Germinal Matrix brain
11 chr13:48838000-48845600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr13:48838000-48845600 Weak transcription HMEC breast
13 chr13:48838000-48847000 Weak transcription H9 Cell Line embryonic stem cell
14 chr13:48838000-48847800 Weak transcription Muscle Satellite Cultured Cells --
15 chr13:48838000-48847800 Weak transcription Psoas Muscle Psoas
16 chr13:48838000-48849600 Weak transcription Right Ventricle heart
17 chr13:48838000-48850000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr13:48838000-48850000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr13:48838000-48852800 Weak transcription HUVEC blood vessel
20 chr13:48838200-48845400 Weak transcription Fetal Intestine Large intestine
21 chr13:48838200-48849600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr13:48838400-48845200 Weak transcription Osteobl bone
23 chr13:48838400-48846600 Weak transcription NHDF-Ad bronchial
24 chr13:48838400-48847000 Weak transcription Brain Substantia Nigra brain
25 chr13:48839200-48845200 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr13:48839200-48846200 Weak transcription Brain Hippocampus Middle brain
27 chr13:48839800-48845000 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr13:48839800-48845600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr13:48839800-48845600 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr13:48839800-48848600 Weak transcription Rectal Smooth Muscle rectum
31 chr13:48839800-48850200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr13:48840000-48844800 Weak transcription Primary T cells fromperipheralblood blood
33 chr13:48840000-48845200 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr13:48840000-48851600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr13:48840200-48846600 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr13:48841800-48844800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr13:48841800-48846200 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr13:48841800-48852000 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr13:48841800-48853200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr13:48843000-48845000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr13:48843200-48845000 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr13:48843200-48845000 Strong transcription Placenta Placenta
43 chr13:48843200-48845200 Strong transcription Fetal Thymus thymus
44 chr13:48843800-48846000 Weak transcription Colonic Mucosa Colon
45 chr13:48843800-48846000 Weak transcription Gastric stomach
46 chr13:48843800-48846000 Weak transcription Stomach Smooth Muscle stomach
47 chr13:48843800-48847000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr13:48843800-48849800 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr13:48843800-48850400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr13:48844000-48845800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015