The 2.0 version of rSNPBase

Variant report

Variant rs74084824
Chromosome Location chr13:51946472-51946473
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:51932000-51947400 Weak transcription Brain Inferior Temporal Lobe brain
2 chr13:51933600-51947600 Weak transcription Brain Substantia Nigra brain
3 chr13:51933800-51947400 Weak transcription Brain Germinal Matrix brain
4 chr13:51934000-51947000 Weak transcription Placenta Amnion Placenta Amnion
5 chr13:51934200-51958400 Strong transcription Placenta Placenta
6 chr13:51934200-51959800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr13:51934400-51947400 Weak transcription Psoas Muscle Psoas
8 chr13:51934400-51963800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr13:51934600-51955800 Weak transcription Fetal Intestine Small intestine
10 chr13:51935000-51949400 Weak transcription Colonic Mucosa Colon
11 chr13:51935400-51957800 Strong transcription Fetal Thymus thymus
12 chr13:51935400-51959600 Strong transcription GM12878-XiMat blood
13 chr13:51935600-51954000 Weak transcription Stomach Mucosa stomach
14 chr13:51935600-51971400 Weak transcription Gastric stomach
15 chr13:51935800-51954800 Strong transcription Primary T cells fromperipheralblood blood
16 chr13:51935800-51962000 Strong transcription Dnd41 blood
17 chr13:51936000-51947600 Weak transcription Small Intestine intestine
18 chr13:51936200-51963600 Strong transcription Liver Liver
19 chr13:51936400-51966000 Weak transcription Right Ventricle heart
20 chr13:51937000-51949800 Weak transcription Fetal Brain Male brain
21 chr13:51937400-51953200 Strong transcription Fetal Intestine Large intestine
22 chr13:51937400-51961800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr13:51937600-51947400 Weak transcription K562 blood
24 chr13:51937600-51954400 Weak transcription Fetal Heart heart
25 chr13:51938200-51960000 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr13:51938400-51959200 Strong transcription Primary B cells from peripheral blood blood
27 chr13:51938400-51959600 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr13:51938600-51952200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr13:51938600-51959400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr13:51938600-51960400 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr13:51938600-51961800 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr13:51938800-51954400 Strong transcription Rectal Mucosa Donor 31 rectum
33 chr13:51939200-51947600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr13:51939200-51949000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr13:51939200-51954400 Strong transcription HMEC breast
36 chr13:51939200-51954600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr13:51939200-51970600 Weak transcription Brain Angular Gyrus brain
38 chr13:51939400-51962200 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr13:51940200-51950000 Strong transcription Primary T helper naive cells fromperipheralblood blood
40 chr13:51940200-51954600 Strong transcription Primary hematopoietic stem cells blood
41 chr13:51940400-51958000 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr13:51940400-51959200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr13:51940600-51952600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr13:51940800-51947800 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr13:51941000-51949200 Strong transcription Primary T cells from cord blood blood
46 chr13:51941000-51949400 Strong transcription Fetal Muscle Leg muscle
47 chr13:51941200-51948600 Strong transcription Brain Anterior Caudate brain
48 chr13:51941200-51950000 Strong transcription Fetal Muscle Trunk muscle
49 chr13:51941200-51954000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr13:51941200-51958000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015