The 2.0 version of rSNPBase

Variant report

Variant rs9596512
Chromosome Location chr13:52012833-52012834
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:51945800-52016600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr13:51949400-52025000 Weak transcription Fetal Muscle Leg muscle
3 chr13:51950000-52025200 Weak transcription Fetal Muscle Trunk muscle
4 chr13:51963200-52024800 Weak transcription Fetal Intestine Large intestine
5 chr13:51971800-52025000 Weak transcription Fetal Stomach stomach
6 chr13:51972000-52016000 Weak transcription Pancreas Pancrea
7 chr13:51984400-52024800 Weak transcription Placenta Amnion Placenta Amnion
8 chr13:51988800-52024400 Weak transcription Rectal Smooth Muscle rectum
9 chr13:51990000-52016600 Weak transcription Fetal Intestine Small intestine
10 chr13:51992400-52025400 Weak transcription Esophagus oesophagus
11 chr13:51995400-52023400 Weak transcription Fetal Kidney kidney
12 chr13:51995400-52024600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr13:51995600-52019000 Weak transcription Gastric stomach
14 chr13:51995600-52023400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr13:51995600-52025000 Weak transcription Right Ventricle heart
16 chr13:51995600-52025600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr13:51997000-52025200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr13:51997400-52024400 Weak transcription Thymus Thymus
19 chr13:51997600-52023200 Weak transcription Primary hematopoietic stem cells blood
20 chr13:51997600-52023600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr13:51999800-52022400 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr13:51999800-52023000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr13:52000600-52025200 Weak transcription Small Intestine intestine
24 chr13:52001200-52022800 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr13:52001400-52024600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr13:52001600-52024400 Weak transcription Brain Cingulate Gyrus brain
27 chr13:52001800-52023000 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr13:52002200-52024000 Weak transcription Brain Anterior Caudate brain
29 chr13:52003600-52024200 Weak transcription NHLF lung
30 chr13:52003800-52023400 Weak transcription H1 Cell Line embryonic stem cell
31 chr13:52003800-52024600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr13:52004000-52021800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr13:52004200-52024800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr13:52004400-52019600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr13:52004400-52023000 Weak transcription Fetal Lung lung
36 chr13:52004400-52023200 Weak transcription HepG2 liver
37 chr13:52004400-52023400 Weak transcription Primary monocytes fromperipheralblood blood
38 chr13:52004400-52024200 Weak transcription Adipose Nuclei Adipose
39 chr13:52004400-52024600 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr13:52004600-52020400 Weak transcription Fetal Thymus thymus
41 chr13:52004600-52023400 Weak transcription Primary B cells from peripheral blood blood
42 chr13:52004600-52023600 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr13:52004600-52024200 Weak transcription Primary T cells fromperipheralblood blood
44 chr13:52004600-52024200 Weak transcription Duodenum Mucosa Duodenum
45 chr13:52004600-52024800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr13:52004600-52025200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr13:52004800-52014600 Weak transcription NHDF-Ad bronchial
48 chr13:52004800-52021400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr13:52004800-52022600 Weak transcription Placenta Placenta
50 chr13:52004800-52023400 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015