Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10922811	1.00[EUR][1000 genomes]
rs11487633	1.00[EUR][1000 genomes]
rs12057810	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12058169	1.00[EUR][1000 genomes]
rs12062997	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12063919	1.00[EUR][1000 genomes]
rs12065814	0.92[EUR][1000 genomes]
rs12066835	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12074198	1.00[EUR][1000 genomes]
rs12074419	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12076670	1.00[EUR][1000 genomes]
rs12076765	1.00[EUR][1000 genomes]
rs12080222	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12085161	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12086859	0.92[EUR][1000 genomes]
rs4514225	1.00[EUR][1000 genomes]
rs4514226	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60343921	1.00[EUR][1000 genomes]
rs6665059	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6665162	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74099405	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74099418	1.00[AMR][1000 genomes]
rs74099427	1.00[AMR][1000 genomes]
rs74100374	1.00[EUR][1000 genomes]
rs74100375	1.00[EUR][1000 genomes]
rs74100377	1.00[EUR][1000 genomes]
rs74100378	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv546803	chr1:90679734-90777717	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:90692000-90706200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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