The 2.0 version of rSNPBase

Variant report

Variant rs74128343
Chromosome Location chr1:174292135-174292136
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174284600-174294600 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:174284800-174294400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:174285200-174294800 Weak transcription Right Ventricle heart
4 chr1:174285200-174295200 Weak transcription Brain Hippocampus Middle brain
5 chr1:174286000-174296400 Weak transcription Brain Angular Gyrus brain
6 chr1:174287000-174293800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:174287000-174296600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:174287200-174294600 Weak transcription Ovary ovary
9 chr1:174287200-174294800 Weak transcription Gastric stomach
10 chr1:174288400-174292400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:174288600-174292200 ZNF genes & repeats Primary B cells from cord blood blood
12 chr1:174288600-174292200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:174289000-174292200 ZNF genes & repeats Primary B cells from peripheral blood blood
14 chr1:174289000-174295400 ZNF genes & repeats GM12878-XiMat blood
15 chr1:174289400-174292200 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
16 chr1:174290200-174294600 Weak transcription Rectal Smooth Muscle rectum
17 chr1:174290600-174292200 ZNF genes & repeats Dnd41 blood
18 chr1:174290600-174294600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr1:174290600-174294600 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:174290600-174294800 Weak transcription Lung lung
21 chr1:174290600-174294800 Weak transcription Pancreas Pancrea
22 chr1:174290800-174292200 Enhancers NHEK skin
23 chr1:174290800-174293200 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr1:174291000-174292200 Strong transcription Primary T cells fromperipheralblood blood
25 chr1:174291000-174293800 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr1:174291000-174294600 Weak transcription Liver Liver
27 chr1:174291000-174294800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:174291200-174292200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
29 chr1:174291400-174292200 ZNF genes & repeats Primary T cells from cord blood blood
30 chr1:174291400-174292200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
31 chr1:174291600-174294000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:174291600-174294400 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:174291800-174292200 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
34 chr1:174291800-174294600 Weak transcription Primary monocytes fromperipheralblood blood
35 chr1:174291800-174294600 Weak transcription Duodenum Mucosa Duodenum
36 chr1:174291800-174294800 Weak transcription Fetal Lung lung
37 chr1:174292000-174294200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:174292000-174294600 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr1:174292000-174294600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:174292000-174294600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:174292000-174294600 Weak transcription Left Ventricle heart
42 chr1:174292000-174294800 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr1:174292000-174294800 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015