Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:185755489..185757361-chr1:185758549..185760454,2	MCF-7	breast:
2	chr1:185702948..185704971-chr1:185758982..185760508,2	MCF-7	breast:
3	chr1:185284439..185286722-chr1:185759888..185761737,2	K562	blood:

Variant related genes	Relation type
ENSG00000143341	Chromatin interaction
ENSG00000116679	Chromatin interaction

rSNPs within LD-proxies of this variant (count:19)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv548398	chr1:185136458-186003094	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
2	esv3424090	chr1:185679718-186270877	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:185755200-185760000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr1:185755400-185766600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:185756400-185761600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:185757600-185760000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr1:185757600-185760200	Enhancers	Fetal Intestine Large	intestine
6	chr1:185757800-185760000	Enhancers	Osteobl	bone
7	chr1:185758000-185760000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr1:185758400-185760000	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr1:185758400-185760000	Enhancers	Aorta	Aorta
10	chr1:185758400-185760000	Enhancers	Fetal Heart	heart
11	chr1:185758800-185760000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr1:185758800-185760000	Enhancers	Adipose Nuclei	Adipose
13	chr1:185758800-185760000	Enhancers	Fetal Intestine Small	intestine
14	chr1:185759000-185760000	Enhancers	Gastric	stomach
15	chr1:185759000-185760000	Enhancers	Sigmoid Colon	Sigmoid Colon
16	chr1:185759200-185760000	Enhancers	HUVEC	blood vessel
17	chr1:185759200-185760200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr1:185759200-185767000	Weak transcription	Fetal Lung	lung
19	chr1:185759600-185760000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr1:185759800-185764000	Weak transcription	Muscle Satellite Cultured Cells	--

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