Variant report

Variant	rs74136755
Chromosome Location	chr10:57737301-57737302
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs56063008	1.00[AMR][1000 genomes]
rs56137756	1.00[AMR][1000 genomes]
rs56852561	1.00[AMR][1000 genomes]
rs57471116	1.00[AMR][1000 genomes]
rs57631270	1.00[AMR][1000 genomes]
rs74136758	1.00[AMR][1000 genomes]
rs74136762	1.00[AMR][1000 genomes]
rs74136776	1.00[AMR][1000 genomes]
rs74136777	1.00[AMR][1000 genomes]
rs74136903	1.00[AMR][1000 genomes]
rs74136908	1.00[AMR][1000 genomes]
rs74136910	1.00[AMR][1000 genomes]
rs74136911	1.00[AMR][1000 genomes]
rs9415383	1.00[AMR][1000 genomes]
rs9415404	1.00[AMR][1000 genomes]
rs9415408	1.00[AMR][1000 genomes]
rs9416438	1.00[AMR][1000 genomes]
rs9416439	1.00[AMR][1000 genomes]
rs9416441	1.00[AMR][1000 genomes]
rs9416444	1.00[AMR][1000 genomes]
rs9416446	1.00[AMR][1000 genomes]
rs9416448	1.00[AMR][1000 genomes]
rs9416450	1.00[AMR][1000 genomes]
rs9416456	1.00[AMR][1000 genomes]
rs9416463	1.00[AMR][1000 genomes]
rs9416476	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040047	chr10:57007182-57979747	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1051512	chr10:57470352-58026988	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv540645	chr10:57470352-58026988	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1035611	chr10:57577564-57762083	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv2750965	chr10:57634812-57779230	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv895498	chr10:57646996-57788090	Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv895499	chr10:57679902-57788090	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	nsv1042268	chr10:57702808-57760297	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	nsv1038656	chr10:57710330-57769294	Flanking Active TSS Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
10	nsv895500	chr10:57718804-57806382	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
11	esv16511	chr10:57721864-57779243	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
12	nsv971885	chr10:57727587-57893001	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
13	nsv895501	chr10:57736009-57928768	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:57737200-57738400	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr10:57737200-57738600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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