Variant report

Variant	rs74137740
Chromosome Location	chr10:43978335-43978336
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:43971469..43973705-chr10:43977289..43979716,2	K562	blood:
2	chr10:43970982..43973705-chr10:43978216..43981135,2	K562	blood:
3	chr10:43976615..43979208-chr10:43982214..43983793,2	K562	blood:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs55957438	1.00[AFR][1000 genomes]
rs56305563	0.89[AFR][1000 genomes]
rs57050417	0.89[AFR][1000 genomes]
rs58052353	0.89[AFR][1000 genomes]
rs58829593	1.00[AFR][1000 genomes]
rs59615405	0.89[AFR][1000 genomes]
rs59946114	0.89[AFR][1000 genomes]
rs61859052	0.89[AFR][1000 genomes]
rs74137733	0.89[AFR][1000 genomes]
rs74137734	0.89[AFR][1000 genomes]
rs74137735	0.89[AFR][1000 genomes]
rs74137736	0.89[AFR][1000 genomes]
rs74137738	0.89[AFR][1000 genomes]
rs74137739	0.89[AFR][1000 genomes]
rs74137741	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895087	chr10:43783339-43982390	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv831842	chr10:43846541-43987501	Strong transcription Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
3	nsv895088	chr10:43871999-44003101	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
4	nsv1046236	chr10:43968075-44012933	ZNF genes & repeats Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:43967400-43978600	Weak transcription	Pancreas	Pancrea
2	chr10:43974800-43982600	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr10:43976000-43979200	ZNF genes & repeats	Liver	Liver
4	chr10:43976200-43978600	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr10:43976200-43978600	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr10:43976200-43978600	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
7	chr10:43976200-43978800	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
8	chr10:43976400-43978400	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr10:43976400-43978400	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
10	chr10:43976400-43978400	ZNF genes & repeats	Adipose Nuclei	Adipose
11	chr10:43976400-43978600	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
12	chr10:43976400-43978600	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
13	chr10:43976400-43978600	ZNF genes & repeats	Ovary	ovary
14	chr10:43976400-43978800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr10:43976600-43978600	ZNF genes & repeats	Duodenum Mucosa	Duodenum
16	chr10:43977000-43978400	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
17	chr10:43977000-43979000	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
18	chr10:43977200-43978400	ZNF genes & repeats	Left Ventricle	heart
19	chr10:43977200-43978400	ZNF genes & repeats	Psoas Muscle	Psoas
20	chr10:43977200-43978600	ZNF genes & repeats	Primary B cells from cord blood	blood
21	chr10:43977200-43978600	ZNF genes & repeats	Brain Angular Gyrus	brain
22	chr10:43977200-43978600	ZNF genes & repeats	Brain Cingulate Gyrus	brain
23	chr10:43977200-43978600	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
24	chr10:43977200-43978600	ZNF genes & repeats	Fetal Lung	lung
25	chr10:43977200-43978600	ZNF genes & repeats	HSMMtube	muscle
26	chr10:43977200-43978800	ZNF genes & repeats	Brain Hippocampus Middle	brain
27	chr10:43977400-43978400	ZNF genes & repeats	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr10:43977400-43978400	ZNF genes & repeats	Dnd41	blood
29	chr10:43977600-43978400	ZNF genes & repeats	Brain Anterior Caudate	brain
30	chr10:43977800-43978600	ZNF genes & repeats	Fetal Brain Male	brain

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