Variant report

Variant	rs74141639
Chromosome Location	chr1:216883842-216883843
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11572674	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12058262	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12062617	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12065312	1.00[AMR][1000 genomes]
rs12079096	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12083154	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12083476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12086557	1.00[AMR][1000 genomes]
rs12088824	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12092631	1.00[AMR][1000 genomes]
rs12093353	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17043790	1.00[AMR][1000 genomes]
rs2789718	0.84[AFR][1000 genomes]
rs4338427	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55671306	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56102915	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56262359	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56956026	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59779978	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60801991	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74141640	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74141641	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74141642	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74141643	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74143433	1.00[AMR][1000 genomes]
rs74143434	1.00[AMR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216868200-216894000	Weak transcription	Placenta	Placenta
2	chr1:216879400-216888400	Weak transcription	Gastric	stomach
3	chr1:216883200-216884000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr1:216883200-216884400	Flanking Active TSS	Fetal Heart	heart
5	chr1:216883400-216884200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr1:216883400-216884400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr1:216883600-216884200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr1:216883600-216884200	Enhancers	Left Ventricle	heart
9	chr1:216883600-216894600	Weak transcription	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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