Variant report

Variant rs74142616
Chromosome Location chr1:228353138-228353139
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228351600-228353200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
2 chr1:228351800-228353400 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:228352000-228353200 Enhancers Fetal Heart heart
4 chr1:228352200-228353200 Flanking Active TSS Dnd41 blood
5 chr1:228352400-228353200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
6 chr1:228352400-228353200 Flanking Active TSS K562 blood
7 chr1:228352400-228354200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:228352400-228354200 Active TSS Thymus Thymus
9 chr1:228352600-228353200 Flanking Active TSS Primary B cells from cord blood blood
10 chr1:228352600-228353200 Flanking Active TSS Primary hematopoietic stem cells blood
11 chr1:228352600-228353200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
12 chr1:228352600-228353200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
13 chr1:228352600-228353200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:228352600-228353200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:228352600-228353200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:228352600-228353200 Flanking Active TSS Adipose Nuclei Adipose
17 chr1:228352600-228353200 Flanking Active TSS Brain Inferior Temporal Lobe brain
18 chr1:228352600-228353200 Flanking Active TSS Fetal Stomach stomach
19 chr1:228352600-228354000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:228352600-228354000 Active TSS Cortex derived primary cultured neurospheres brain
21 chr1:228352600-228354000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:228352600-228354200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:228352600-228354200 Active TSS Colonic Mucosa Colon
24 chr1:228352600-228354200 Active TSS Rectal Mucosa Donor 29 rectum
25 chr1:228352600-228354200 Active TSS GM12878-XiMat blood
26 chr1:228352600-228354400 Active TSS iPS-20b Cell Line embryonic stem cell
27 chr1:228352600-228354400 Active TSS A549 lung
28 chr1:228352600-228354600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:228352600-228354800 Active TSS HSMM muscle
30 chr1:228352800-228353200 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:228352800-228353200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:228352800-228353200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:228352800-228353200 Flanking Active TSS Primary monocytes fromperipheralblood blood
34 chr1:228352800-228353200 Flanking Active TSS Primary B cells from peripheral blood blood
35 chr1:228352800-228353200 Flanking Active TSS Primary T cells fromperipheralblood blood
36 chr1:228352800-228353200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
37 chr1:228352800-228353200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
38 chr1:228352800-228353200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
39 chr1:228352800-228353200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
40 chr1:228352800-228353200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
41 chr1:228352800-228353200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
42 chr1:228352800-228353200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
43 chr1:228352800-228353200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:228352800-228353200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
45 chr1:228352800-228353200 Flanking Active TSS Liver Liver
46 chr1:228352800-228353200 Flanking Active TSS Brain Cingulate Gyrus brain
47 chr1:228352800-228353200 Flanking Active TSS Duodenum Mucosa Duodenum
48 chr1:228352800-228353200 Active TSS Fetal Brain Male brain
49 chr1:228352800-228353200 Flanking Active TSS Fetal Intestine Small intestine
50 chr1:228352800-228353200 Active TSS Fetal Kidney kidney

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