Variant report
Variant | rs7416578 |
---|---|
Chromosome Location | chr1:214425835-214425836 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:214422523..214426510-chr1:214432301..214435212,4 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10465696 | 1.00[JPT][hapmap] |
rs1048791 | 1.00[JPT][hapmap] |
rs11120298 | 1.00[JPT][hapmap] |
rs11120299 | 1.00[JPT][hapmap] |
rs11800749 | 1.00[JPT][hapmap] |
rs1391553 | 1.00[JPT][hapmap] |
rs17022608 | 1.00[JPT][hapmap] |
rs17730755 | 1.00[JPT][hapmap] |
rs17731174 | 1.00[JPT][hapmap] |
rs17786949 | 1.00[JPT][hapmap] |
rs2047445 | 1.00[JPT][hapmap] |
rs3767842 | 1.00[JPT][hapmap] |
rs4655244 | 1.00[JPT][hapmap] |
rs4655330 | 1.00[JPT][hapmap] |
rs4655332 | 1.00[JPT][hapmap] |
rs4655333 | 1.00[JPT][hapmap] |
rs4655334 | 1.00[JPT][hapmap] |
rs4655336 | 1.00[JPT][hapmap] |
rs6540814 | 0.90[AMR][1000 genomes] |
rs6660335 | 1.00[JPT][hapmap] |
rs6687629 | 1.00[JPT][hapmap] |
rs6695148 | 1.00[JPT][hapmap] |
rs7412913 | 1.00[JPT][hapmap] |
rs867444 | 1.00[JPT][hapmap] |
rs867445 | 1.00[JPT][hapmap] |
rs867446 | 1.00[JPT][hapmap] |
rs904321 | 1.00[JPT][hapmap] |
rs9429914 | 0.91[AMR][1000 genomes] |
rs9430129 | 0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs9430131 | 1.00[JPT][hapmap] |
rs9430133 | 1.00[JPT][hapmap] |
rs955920 | 1.00[JPT][hapmap] |
rs958304 | 1.00[JPT][hapmap] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:214417800-214432800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |