Variant report

Variant	rs742994
Chromosome Location	chr11:32333377-32333378
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32332808..32334423-chr11:32337142..32339062,2	MCF-7	breast:
2	chr11:32332711..32334825-chr11:32340533..32342781,2	K562	blood:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1022624	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1022625	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10488685	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10835879	0.90[EUR][1000 genomes]
rs10835883	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10835884	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10835885	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11031704	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11031714	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11031716	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11031733	0.80[EUR][1000 genomes]
rs11828433	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12285028	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12285041	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12361455	0.88[CEU][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2003731	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61889170	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61889172	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61889173	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61889186	0.80[EUR][1000 genomes]
rs7106353	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7116279	0.86[EUR][1000 genomes]
rs7121219	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs742995	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs742996	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7924866	0.83[EUR][1000 genomes]
rs7928458	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7944182	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32325000-32334200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:32329800-32334600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:32330800-32333400	Enhancers	Hela-S3	cervix
4	chr11:32330800-32334000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:32331400-32333600	Enhancers	A549	lung
6	chr11:32331400-32334200	Enhancers	Fetal Kidney	kidney
7	chr11:32332400-32334400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr11:32332600-32333600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr11:32332800-32335200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr11:32333200-32333600	Enhancers	NH-A	brain

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