Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1604148	0.84[EUR][1000 genomes]
rs17449242	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs17533734	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs348497	0.87[EUR][1000 genomes]
rs348509	0.84[EUR][1000 genomes]
rs348527	0.84[EUR][1000 genomes]
rs348537	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs348538	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs348540	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs348542	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs348552	0.94[EUR][1000 genomes]
rs348553	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs385643	0.85[EUR][1000 genomes]
rs407348	0.90[EUR][1000 genomes]
rs448110	0.90[EUR][1000 genomes]
rs4499729	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4695094	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4695095	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4695099	1.00[AFR][1000 genomes]
rs6447442	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9994867	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv594104	chr4:45105210-45665828	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:45325600-45328200	Enhancers	Fetal Heart	heart
2	chr4:45326200-45328000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:45326600-45328000	Enhancers	Fetal Brain Male	brain

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