Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:74160251..74162988-chr15:74171471..74174133,2	K562	blood:
2	chr15:74138773..74141661-chr15:74162026..74163857,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12438872	0.88[ASN][1000 genomes]
rs12438959	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12440507	0.83[ASN][1000 genomes]
rs12442246	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12591598	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12915956	0.88[ASN][1000 genomes]
rs12916069	0.81[ASN][1000 genomes]
rs2278864	0.88[ASN][1000 genomes]
rs2290345	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34911689	0.83[ASN][1000 genomes]
rs35051165	0.83[ASN][1000 genomes]
rs4243035	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4577028	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4625681	0.83[ASN][1000 genomes]
rs4886725	0.96[ASN][1000 genomes]
rs7178188	0.85[EUR][1000 genomes]
rs7496005	0.96[ASN][1000 genomes]
rs896590	0.88[ASN][1000 genomes]
rs921541	0.88[EUR][1000 genomes]
rs9806513	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043335	chr15:74078689-74241186	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74154800-74167000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr15:74158600-74164600	Enhancers	Right Atrium	heart
3	chr15:74160000-74163400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr15:74161400-74163400	Weak transcription	Ovary	ovary
5	chr15:74161600-74163800	Enhancers	Left Ventricle	heart
6	chr15:74161600-74164600	Enhancers	Right Ventricle	heart
7	chr15:74161800-74163000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr15:74162600-74164600	Enhancers	Fetal Intestine Large	intestine
9	chr15:74162600-74164800	Enhancers	Fetal Intestine Small	intestine
10	chr15:74162800-74163000	Flanking Active TSS	Stomach Mucosa	stomach

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