Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10096137	0.82[CEU][hapmap]
rs10101000	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10108373	1.00[CEU][hapmap]
rs10738134	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10955953	1.00[CEU][hapmap]
rs12546625	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12680859	1.00[CEU][hapmap]
rs35529075	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4282615	0.95[CEU][hapmap];0.83[EUR][1000 genomes]
rs4336644	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4407920	0.95[CEU][hapmap];0.81[EUR][1000 genomes]
rs4407921	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4633103	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs4871039	0.90[EUR][1000 genomes]
rs4871042	0.83[EUR][1000 genomes]
rs4871043	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4871044	0.95[CEU][hapmap];0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6469898	1.00[CEU][hapmap]
rs6469899	1.00[CEU][hapmap]
rs66488706	0.92[EUR][1000 genomes]
rs6996015	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7001214	1.00[CEU][hapmap]
rs7827219	1.00[CEU][hapmap]
rs7834024	1.00[CEU][hapmap]
rs9297614	1.00[CEU][hapmap]
rs9969405	1.00[CEU][hapmap]
rs9969477	1.00[CEU][hapmap]
rs9969584	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891418	chr8:120600965-121301474	Active TSS Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
2	esv3348294	chr8:121000288-121250984	Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121152400-121165400	Weak transcription	Ovary	ovary
2	chr8:121154600-121173800	Weak transcription	Fetal Stomach	stomach
3	chr8:121154600-121175200	Weak transcription	Aorta	Aorta
4	chr8:121155400-121170600	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr8:121159600-121166600	Weak transcription	Fetal Intestine Large	intestine
6	chr8:121159600-121186200	Weak transcription	Fetal Muscle Trunk	muscle
7	chr8:121161600-121165400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr8:121161800-121164800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr8:121161800-121165000	Weak transcription	Fetal Lung	lung
10	chr8:121162400-121173200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr8:121164200-121165400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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