Variant report

Variant	rs7502947
Chromosome Location	chr17:57229716-57229717
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr17:57229691-57229741	NHBE	bronchial:	n/a
2	chr17:57229691-57229741	HIPEpiC	eye:	n/a
3	chr17:57229691-57229741	AG04449	skin:	fetal
4	chr17:57229691-57229741	SAEC	small airway:	n/a
5	chr17:57229691-57229741	AG04450	lung:	fetal
6	chr17:57229691-57229741	HL-60	blood:	n/a
7	chr17:57229691-57229741	K562	blood:	n/a
8	chr17:57229691-57229741	H1-hESC	embryonic stem cell:	embryo
9	chr17:57229691-57229741	MCF-7	breast:	n/a
10	chr17:57229691-57229741	IMR90	lung:	fetal
11	chr17:57229691-57229741	NH-A	brain:	n/a
12	chr17:57229691-57229741	SK-N-SH_RA	brain:	n/a
13	chr17:57229691-57229741	HRPEpiC	eye:	n/a
14	chr17:57229691-57229741	HAEpiC	amniotic membrane:	n/a
15	chr17:57229691-57229741	PANC-1	pancreas:	n/a
16	chr17:57229691-57229741	PrEC	prostate:	n/a
17	chr17:57229691-57229741	A549	lung:	n/a
18	chr17:57229691-57229741	HCT-116	colon:	n/a
19	chr17:57229691-57229741	NT2-D1	testis:	n/a
20	chr17:57229691-57229741	HNPCEpiC	eye:	n/a
21	chr17:57229691-57229741	HCF	heart:	n/a
22	chr17:57229691-57229741	MCF10A-Er-Src	breast:	n/a
23	chr17:57229691-57229741	GM12892	blood:	n/a
24	chr17:57229691-57229741	ProgFib	skin:	n/a
25	chr17:57229691-57229741	BE2_C	brain:	n/a
26	chr17:57229691-57229741	Hela-S3	cervix:	n/a
27	chr17:57229691-57229741	SKMC	muscle:	n/a
28	chr17:57229691-57229741	Jurkat	blood:	n/a
29	chr17:57229691-57229741	HEK293	kidney:	embryo
30	chr17:57229691-57229741	GM12878	blood:	n/a
31	chr17:57229691-57229741	SK-N-SH	brain:	n/a
32	chr17:57229691-57229741	AoSMC	blood vessel:	n/a
33	chr17:57229691-57229741	ovcar-3	ovarian:	n/a
34	chr17:57229691-57229741	GM12891	blood:	n/a
35	chr17:57229691-57229741	U87	brain:	n/a
36	chr17:57229691-57229741	HRCEpiC	kidney:	n/a
37	chr17:57229691-57229741	AG10803	skin:	n/a
38	chr17:57229691-57229741	Hepatocyte	liver:	n/a
39	chr17:57229691-57229741	HPAEpiC	pulmonary alveolar:	n/a
40	chr17:57229691-57229741	PFSK-1	brain:	n/a
41	chr17:57229691-57229741	HepG2	liver:	n/a
42	chr17:57229691-57229741	HCM	heart:	n/a
43	chr17:57229691-57229741	RPTEC	kidney:	n/a
44	chr17:57229691-57229741	HMEC	breast:	n/a
45	chr17:57229691-57229741	ECC-1	luminal epithelium:	n/a
46	chr17:57229691-57229741	HCPEpiC	choroid plexus:	n/a
47	chr17:57229691-57229741	CMK	blood:	n/a
48	chr17:57229691-57229741	AG09309	skin:	n/a
49	chr17:57229691-57229741	GM06990	blood:	n/a
50	chr17:57229691-57229741	GM19239	blood:	n/a

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:57180310..57187428-chr17:57229084..57235888,17	MCF-7	breast:
2	chr17:57182699..57185513-chr17:57229234..57234346,6	K562	blood:
3	chr17:57226278..57232356-chr17:57232392..57239608,17	K562	blood:
4	chr17:57182396..57186542-chr17:57229642..57234395,10	MCF-7	breast:
5	chr17:57229280..57233408-chr17:57285165..57288796,4	K562	blood:
6	chr17:56734941..56738027-chr17:57229531..57233595,9	MCF-7	breast:
7	chr17:57229367..57232421-chr17:57295586..57297821,3	K562	blood:

No data

Variant related genes	Relation type
MIR301A	CpG island
PRR11	CpG island
SKA2	CpG island
ENSG00000224738	Chromatin interaction
ENSG00000167447	Chromatin interaction
ENSG00000108395	Chromatin interaction
ENSG00000202077	Chromatin interaction
ENSG00000182628	Chromatin interaction
ENSG00000068489	Chromatin interaction

Extended variants
information (count: 70 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs11654986	0.87[MEX][hapmap]
rs11656413	0.82[MEX][hapmap]
rs12051896	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12051897	0.90[CHB][hapmap];0.85[CHD][hapmap];0.90[JPT][hapmap];0.87[TSI][hapmap];0.90[ASN][1000 genomes]
rs12603238	0.87[MEX][hapmap]
rs12947785	0.87[MEX][hapmap]
rs2055779	0.83[MEX][hapmap]
rs2333410	0.87[MEX][hapmap]
rs3826353	0.83[MEX][hapmap]
rs4932693	0.83[MEX][hapmap]
rs62081890	1.00[ASN][1000 genomes]
rs62081892	0.91[ASN][1000 genomes]
rs6416932	0.87[MEX][hapmap]
rs6503890	0.87[MEX][hapmap]
rs6503893	0.87[MEX][hapmap]
rs6503898	0.96[ASN][1000 genomes]
rs7208505	0.87[MEX][hapmap]
rs7213269	1.00[CHB][hapmap];0.95[CHD][hapmap];0.86[JPT][hapmap];0.95[ASN][1000 genomes]
rs7214098	0.87[MEX][hapmap]
rs7217845	1.00[CHB][hapmap];0.95[CHD][hapmap];0.86[JPT][hapmap];0.95[ASN][1000 genomes]
rs7223587	0.85[ASN][1000 genomes]
rs7342863	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7502541	0.94[ASN][1000 genomes]
rs7503190	0.87[MEX][hapmap]
rs8067682	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs8072182	0.90[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs8073316	0.95[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs8073699	0.95[ASN][1000 genomes]
rs8077052	0.95[CHB][hapmap];0.92[CHD][hapmap];0.95[JPT][hapmap];0.97[ASN][1000 genomes]
rs8081967	0.87[MEX][hapmap]
rs8082544	0.87[MEX][hapmap]
rs9303403	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9892425	1.00[CHB][hapmap];0.92[CHD][hapmap];0.86[JPT][hapmap];0.95[ASN][1000 genomes]
rs9909925	0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9910629	0.98[ASN][1000 genomes]
rs9911583	0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9915267	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:33 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv908643	chr17:56803028-57249010	Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	227 gene(s)	inside rSNPs	diseases
2	nsv908644	chr17:56803028-57371432	Strong transcription Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	238 gene(s)	inside rSNPs	diseases
3	esv3335958	chr17:56849544-57385398	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	233 gene(s)	inside rSNPs	diseases
4	nsv1065063	chr17:56954121-57346694	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	227 gene(s)	inside rSNPs	diseases
5	nsv1064384	chr17:57049519-57346694	Active TSS ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	219 gene(s)	inside rSNPs	diseases
6	nsv908646	chr17:57061238-57255810	Strong transcription Weak transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	206 gene(s)	inside rSNPs	diseases
7	nsv833499	chr17:57070693-57288410	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	208 gene(s)	inside rSNPs	diseases
8	nsv1066388	chr17:57082013-57339981	Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	209 gene(s)	inside rSNPs	diseases
9	esv2758462	chr17:57082579-57425634	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	213 gene(s)	inside rSNPs	diseases
10	esv2758699	chr17:57082579-57425634	Weak transcription Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	213 gene(s)	inside rSNPs	diseases
11	nsv1066467	chr17:57117682-57338731	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	200 gene(s)	inside rSNPs	diseases
12	nsv1057209	chr17:57117682-57742240	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	240 gene(s)	inside rSNPs	diseases
13	nsv543396	chr17:57117682-57742240	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	240 gene(s)	inside rSNPs	diseases
14	nsv1066788	chr17:57126446-57344129	Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	193 gene(s)	inside rSNPs	diseases
15	nsv482858	chr17:57136446-57288615	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	184 gene(s)	inside rSNPs	diseases
16	nsv908647	chr17:57165097-57290383	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	173 gene(s)	inside rSNPs	diseases
17	nsv908648	chr17:57165097-57322954	Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	179 gene(s)	inside rSNPs	diseases
18	nsv1063542	chr17:57179669-57569673	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	172 gene(s)	inside rSNPs	diseases
19	nsv543397	chr17:57179669-57569673	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	172 gene(s)	inside rSNPs	diseases
20	nsv1062959	chr17:57179669-57680772	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	175 gene(s)	inside rSNPs	diseases
21	nsv1060807	chr17:57189467-57344129	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	114 gene(s)	inside rSNPs	diseases
22	nsv1064115	chr17:57199370-57369270	Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	107 gene(s)	inside rSNPs	diseases
23	esv1803083	chr17:57206124-57233048	Weak transcription Flanking Active TSS Strong transcription Genic enhancers Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	87 gene(s)	inside rSNPs	diseases
24	esv1793348	chr17:57207540-57233048	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA	87 gene(s)	inside rSNPs	diseases
25	esv1800539	chr17:57208752-57233048	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA	87 gene(s)	inside rSNPs	diseases
26	nsv575802	chr17:57208752-57344181	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	102 gene(s)	inside rSNPs	diseases
27	nsv917030	chr17:57229066-57624963	Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
28	nsv534343	chr17:57229181-57624852	Active TSS Genic enhancers Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
29	esv1795330	chr17:57229716-57233048	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	22 gene(s)	inside rSNPs	diseases
30	esv1800313	chr17:57229716-57233048	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	22 gene(s)	inside rSNPs	diseases
31	esv1800358	chr17:57229716-57233048	Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	22 gene(s)	inside rSNPs	diseases
32	esv1800373	chr17:57229716-57233048	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	22 gene(s)	inside rSNPs	diseases
33	esv1803815	chr17:57229716-57233048	Flanking Active TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	22 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7502947	RAD51C	cis	lymphoblastoid	seeQTL
rs7502947	TRIM37	cis	Whole Blood	GTEx

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:57184800-57231000	Weak transcription	Aorta	Aorta
2	chr17:57185000-57231000	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr17:57185000-57231200	Weak transcription	Lung	lung
4	chr17:57186000-57231200	Weak transcription	Colon Smooth Muscle	Colon
5	chr17:57189200-57230400	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr17:57194400-57231200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr17:57195600-57230400	Weak transcription	Fetal Intestine Small	intestine
8	chr17:57198000-57231000	Weak transcription	Primary B cells from peripheral blood	blood
9	chr17:57198200-57230800	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr17:57198800-57231000	Weak transcription	Fetal Muscle Trunk	muscle
11	chr17:57205800-57230800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr17:57206000-57230400	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr17:57206400-57231000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr17:57206600-57230600	Weak transcription	Monocytes-CD14+_RO01746	blood
15	chr17:57206600-57231400	Weak transcription	HSMMtube	muscle
16	chr17:57207000-57231400	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr17:57207200-57230800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
18	chr17:57216400-57231000	Weak transcription	Placenta	Placenta
19	chr17:57219400-57230400	Weak transcription	Fetal Intestine Large	intestine
20	chr17:57221000-57231000	Weak transcription	Primary hematopoietic stem cells	blood
21	chr17:57224600-57230800	Weak transcription	Fetal Muscle Leg	muscle
22	chr17:57226200-57231600	Weak transcription	Pancreas	Pancrea
23	chr17:57226800-57231200	Weak transcription	Ovary	ovary
24	chr17:57227000-57231400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
25	chr17:57227200-57230800	Enhancers	Primary T helper cells PMA-I stimulated	--
26	chr17:57227200-57230800	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr17:57227400-57230800	Weak transcription	Small Intestine	intestine
28	chr17:57227600-57230000	Weak transcription	Primary B cells from cord blood	blood
29	chr17:57227600-57231000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr17:57227600-57231200	Weak transcription	Left Ventricle	heart
31	chr17:57227600-57231400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
32	chr17:57227800-57229800	Enhancers	Primary T cells from cord blood	blood
33	chr17:57227800-57231000	Enhancers	Fetal Lung	lung
34	chr17:57228000-57230400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr17:57228000-57230400	Weak transcription	Fetal Thymus	thymus
36	chr17:57228000-57230600	Active TSS	Brain Germinal Matrix	brain
37	chr17:57228000-57230800	Weak transcription	H1 Cell Line	embryonic stem cell
38	chr17:57228000-57231000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr17:57228200-57229800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
40	chr17:57228200-57230800	Weak transcription	Primary T cells fromperipheralblood	blood
41	chr17:57228200-57231200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr17:57228400-57229800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr17:57228400-57229800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr17:57228400-57229800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
45	chr17:57228400-57230400	Enhancers	ES-I3 Cell Line	embryonic stem cell
46	chr17:57228400-57230400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr17:57228400-57230800	Enhancers	iPS-15b Cell Line	embryonic stem cell
48	chr17:57228400-57230800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
49	chr17:57228400-57231000	Enhancers	Fetal Heart	heart
50	chr17:57228400-57231600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links