Variant report

Variant	rs7525770
Chromosome Location	chr1:220612010-220612011
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10735498	1.00[EUR][1000 genomes]
rs10863556	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs11804188	1.00[EUR][1000 genomes]
rs12748694	1.00[EUR][1000 genomes]
rs1338766	1.00[EUR][1000 genomes]
rs1338767	1.00[EUR][1000 genomes]
rs1338774	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs1338775	0.97[AFR][1000 genomes]
rs1338776	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1361254	1.00[EUR][1000 genomes]
rs1361255	1.00[EUR][1000 genomes]
rs4598492	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1009136	chr1:220607563-220613446	Weak transcription Enhancers	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220606800-220614200	Weak transcription	Fetal Muscle Leg	muscle
2	chr1:220610000-220624000	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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