The 2.0 version of rSNPBase

Variant report

Variant rs7528315
Chromosome Location chr1:214637882-214637883
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214613000-214649400 Weak transcription Lung lung
2 chr1:214621000-214639800 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:214625800-214644800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:214627200-214640000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:214628600-214640600 Weak transcription Right Atrium heart
6 chr1:214628800-214639400 Weak transcription Stomach Mucosa stomach
7 chr1:214629200-214644800 Weak transcription Psoas Muscle Psoas
8 chr1:214633600-214638000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:214634000-214638600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:214634200-214638000 Weak transcription Pancreas Pancrea
11 chr1:214634200-214640000 Weak transcription Fetal Kidney kidney
12 chr1:214634400-214639800 Weak transcription Fetal Lung lung
13 chr1:214634400-214639800 Weak transcription A549 lung
14 chr1:214634400-214640000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:214634400-214644400 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr1:214634400-214645000 Weak transcription HUVEC blood vessel
17 chr1:214634400-214646200 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr1:214634800-214638200 Strong transcription Fetal Intestine Large intestine
19 chr1:214634800-214640000 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:214635000-214638400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:214635000-214638600 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:214635200-214638400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:214635600-214638000 Genic enhancers HMEC breast
24 chr1:214635800-214638200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:214635800-214645000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:214636000-214638600 Strong transcription NHLF lung
27 chr1:214636200-214640600 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:214636400-214638200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:214636400-214638600 Enhancers Fetal Heart heart
30 chr1:214636600-214638000 Enhancers HUES64 Cell Line embryonic stem cell
31 chr1:214636800-214638200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:214636800-214638200 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr1:214636800-214638200 Enhancers Cortex derived primary cultured neurospheres brain
34 chr1:214636800-214638200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:214636800-214638200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:214636800-214638200 Strong transcription Adipose Nuclei Adipose
37 chr1:214636800-214638400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:214636800-214638400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:214636800-214638400 Genic enhancers HSMM muscle
40 chr1:214636800-214638600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:214636800-214638600 Genic enhancers NHEK skin
42 chr1:214637000-214638000 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr1:214637000-214638000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr1:214637000-214638200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:214637000-214638200 Genic enhancers Muscle Satellite Cultured Cells --
46 chr1:214637000-214638200 Strong transcription Fetal Intestine Small intestine
47 chr1:214637000-214638400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:214637000-214638800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:214637000-214639800 Weak transcription NH-A brain
50 chr1:214637000-214640200 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015